Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-225 |
| Cow position: | chr18:22790401-22790173 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 1-247 |
| Cow position: | chr18:22121211-22120957 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 1-258 |
| Cow position: | chr18:3158931-3158667 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 1-258 |
| Cow position: | chr18:35076056-35076320 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 4-247 |
| Cow position: | chr18:33756558-33756800 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 144, 21 |
| Conread position: | 4-250 |
| Cow position: | chr18:52693146-52693385 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 4-258 |
| Cow position: | chr18:19159292-19159037 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 116 |
| Conread position: | 4-258 |
| Cow position: | chr18:47314626-47314354 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 35, 186 |
| Conread position: | 4-260 |
| Cow position: | chr18:35636675-35636411 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 7-212 |
| Cow position: | chr18:36750175-36750366 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 151, 28 |
| Conread position: | 7-234 |
| Cow position: | chr18:15881179-15880947 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 7-253 |
| Cow position: | chr18:39662452-39662710 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 7-255 |
| Cow position: | chr18:8105268-8105013 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 52, 91 |
| Conread position: | 7-258 |
| Cow position: | chr18:36445104-36445374 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 194 |
| Conread position: | 7-259 |
| Cow position: | chr18:2774912-2774665 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 7-259 |
| Cow position: | chr18:45104771-45104509 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 7-260 |
| Cow position: | chr18:25003202-25002943 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 195 |
| Conread position: | 7-265 |
| Cow position: | chr18:26937402-26937664 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 33, 119 |
| Conread position: | 7-265 |
| Cow position: | chr18:52635406-52635137 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 80 |
| Conread position: | 8-189 |
| Cow position: | chr18:13212927-13213113 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 9-254 |
| Cow position: | chr18:40758893-40759137 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 10-259 |
| Cow position: | chr18:21195661-21195409 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 181 |
| Conread position: | 11-260 |
| Cow position: | chr18:20864666-20864925 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 12-255 |
| Cow position: | chr18:26286595-26286842 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 18-253 |
| Cow position: | chr18:12113681-12113448 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 20-266 |
| Cow position: | chr18:35827726-35827466 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 31-266 |
| Cow position: | chr18:39875561-39875316 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 33-247 |
| Cow position: | chr18:20271319-20271096 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 149 |
| Conread position: | 33-250 |
| Cow position: | chr18:4649034-4648816 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 33-273 |
| Cow position: | chr18:33157522-33157766 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 35-259 |
| Cow position: | chr18:13359765-13360000 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 36-258 |
| Cow position: | chr18:48290734-48290507 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 158 |
| Conread position: | 37-259 |
| Cow position: | chr18:6610153-6609922 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 155 |
| Conread position: | 39-255 |
| Cow position: | chr18:42747303-42747524 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 40-266 |
| Cow position: | chr18:47517500-47517274 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 21, 149 |
| Conread position: | 41-260 |
| Cow position: | chr18:31725175-31724941 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 42-175 |
| Cow position: | chr18:18445399-18445263 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 42-255 |
| Cow position: | chr18:31586654-31586436 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 42-266 |
| Cow position: | chr18:54658011-54658253 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 45-265 |
| Cow position: | chr18:36097914-36098145 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 45-266 |
| Cow position: | chr18:19831010-19831251 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 233 |
| Conread position: | 61-259 |
| Cow position: | chr18:46437020-46436828 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 62-254 |
| Cow position: | chr18:37382365-37382162 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 62-255 |
| Cow position: | chr18:21768360-21768563 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 100 |
| Conread position: | 68-259 |
| Cow position: | chr18:35582363-35582165 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 109-273 |
| Cow position: | chr18:18815893-18815720 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.