Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-253 |
| Cow position: | chr19:1355303-1355553 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 147 |
| Conread position: | 1-253 |
| Cow position: | chr19:18843271-18843015 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 186 |
| Conread position: | 1-255 |
| Cow position: | chr19:630635-630885 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 1-255 |
| Cow position: | chr19:1901311-1901044 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-255 |
| Cow position: | chr19:2734142-2734404 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 1-258 |
| Cow position: | chr19:12601502-12601768 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 122 |
| Conread position: | 1-265 |
| Cow position: | chr19:10171680-10171967 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 42, 191 |
| Conread position: | 1-265 |
| Cow position: | chr19:53657591-53657854 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 3-214 |
| Cow position: | chr19:27104442-27104660 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 136, 65 |
| Conread position: | 4-255 |
| Cow position: | chr19:6417293-6417548 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 4-255 |
| Cow position: | chr19:9542204-9541940 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 191 |
| Conread position: | 4-255 |
| Cow position: | chr19:28014173-28014432 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 4-265 |
| Cow position: | chr19:31594992-31595263 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 216 |
| Conread position: | 4-266 |
| Cow position: | chr19:2138412-2138140 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 188 |
| Conread position: | 5-259 |
| Cow position: | chr19:33932449-33932191 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 7-176 |
| Cow position: | chr19:13755587-13755758 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 7-193 |
| Cow position: | chr19:21115003-21115198 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 176 |
| Conread position: | 7-221 |
| Cow position: | chr19:19499856-19499634 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 134, 89 |
| Conread position: | 7-253 |
| Cow position: | chr19:6515957-6516218 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 7-255 |
| Cow position: | chr19:17274020-17273776 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 7-255 |
| Cow position: | chr19:32457338-32457597 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 167 |
| Conread position: | 7-255 |
| Cow position: | chr19:39623085-39622849 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 7-258 |
| Cow position: | chr19:21092476-21092720 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 52, 123 |
| Conread position: | 7-258 |
| Cow position: | chr19:46181116-46180860 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 7-259 |
| Cow position: | chr19:2577272-2577521 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 51, 98 |
| Conread position: | 7-259 |
| Cow position: | chr19:6688309-6688040 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-259 |
| Cow position: | chr19:47727872-47727619 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 132, 126 |
| Conread position: | 7-260 |
| Cow position: | chr19:16694349-16694084 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 7-260 |
| Cow position: | chr19:48409212-48409469 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 178 |
| Conread position: | 7-266 |
| Cow position: | chr19:15437805-15438064 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 202 |
| Conread position: | 7-274 |
| Cow position: | chr19:730034-729772 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 52, 185 |
| Conread position: | 7-274 |
| Cow position: | chr19:38392493-38392775 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 52, 176 |
| Conread position: | 7-275 |
| Cow position: | chr19:14592750-14593027 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 9-255 |
| Cow position: | chr19:13129592-13129826 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 149, 23 |
| Conread position: | 11-247 |
| Cow position: | chr19:54942675-54942919 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 15-289 |
| Cow position: | chr19:21380221-21379932 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 23-266 |
| Cow position: | chr19:44397212-44397468 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 36, 189 |
| Conread position: | 27-259 |
| Cow position: | chr19:10232686-10232455 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 32-244 |
| Cow position: | chr19:19561227-19561454 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 165 |
| Conread position: | 32-255 |
| Cow position: | chr19:51185148-51185378 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 156 |
| Conread position: | 32-259 |
| Cow position: | chr19:39360861-39361099 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 33-247 |
| Cow position: | chr19:9704110-9703891 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 168 |
| Conread position: | 33-255 |
| Cow position: | chr19:990689-990468 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 11, 114 |
| Conread position: | 33-259 |
| Cow position: | chr19:6079627-6079402 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 106, 25 |
| Conread position: | 33-259 |
| Cow position: | chr19:36059654-36059886 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 153 |
| Conread position: | 35-255 |
| Cow position: | chr19:4537688-4537465 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 35-268 |
| Cow position: | chr19:35142289-35142053 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 38-255 |
| Cow position: | chr19:15887595-15887371 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 38-266 |
| Cow position: | chr19:21335885-21335643 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 103, 30 |
| Conread position: | 40-253 |
| Cow position: | chr19:11163352-11163131 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 45-251 |
| Cow position: | chr19:7637503-7637289 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 14, 105 |
| Conread position: | 48-253 |
| Cow position: | chr19:12748025-12747825 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 57-258 |
| Cow position: | chr19:37562243-37562050 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 57-259 |
| Cow position: | chr19:1898482-1898278 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 61-255 |
| Cow position: | chr19:11191870-11191663 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 137 |
| Conread position: | 87-258 |
| Cow position: | chr19:8864528-8864704 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 101 |
| Conread position: | 88-255 |
| Cow position: | chr19:24137038-24137214 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 96-253 |
| Cow position: | chr19:43291836-43292003 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 96-264 |
| Cow position: | chr19:11424521-11424352 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 109-259 |
| Cow position: | chr19:1552036-1552189 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 110-254 |
| Cow position: | chr19:22450130-22449978 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 132-253 |
| Cow position: | chr19:7404549-7404427 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 14 |
Show alignments to all cow chromosomes.