Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-258 |
| Cow position: | chr20:31261477-31261733 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 4-253 |
| Cow position: | chr20:5104687-5104436 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 60, 184 |
| Conread position: | 4-255 |
| Cow position: | chr20:17903906-17904167 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 4-259 |
| Cow position: | chr20:8429495-8429759 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 137, 27 |
| Conread position: | 4-266 |
| Cow position: | chr20:33532057-33532323 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 7-178 |
| Cow position: | chr20:32548718-32548892 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-254 |
| Cow position: | chr20:10539071-10539322 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 52, 94 |
| Conread position: | 7-255 |
| Cow position: | chr20:13876958-13876697 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 7-255 |
| Cow position: | chr20:18185329-18185574 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 125 |
| Conread position: | 7-255 |
| Cow position: | chr20:19751061-19751315 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 7-255 |
| Cow position: | chr20:21019315-21019572 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 53, 182 |
| Conread position: | 7-260 |
| Cow position: | chr20:9536887-9537149 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 7-265 |
| Cow position: | chr20:9473864-9473597 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 7-265 |
| Cow position: | chr20:24069565-24069821 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 61 |
| Conread position: | 7-266 |
| Cow position: | chr20:7659459-7659199 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 141, 50 |
| Conread position: | 7-273 |
| Cow position: | chr20:33435412-33435141 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 8-258 |
| Cow position: | chr20:4621590-4621334 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 180 |
| Conread position: | 9-259 |
| Cow position: | chr20:5077948-5078211 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 15-265 |
| Cow position: | chr20:30817289-30817552 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 24, 172 |
| Conread position: | 17-254 |
| Cow position: | chr20:17734013-17733769 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 124, 54 |
| Conread position: | 19-233 |
| Cow position: | chr20:41119683-41119897 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 19-255 |
| Cow position: | chr20:6903091-6903322 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 26-247 |
| Cow position: | chr20:24391756-24391979 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 41 |
| Conread position: | 31-258 |
| Cow position: | chr20:30777950-30778183 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 30, 134 |
| Conread position: | 32-259 |
| Cow position: | chr20:29633216-29632989 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 33-255 |
| Cow position: | chr20:7442348-7442120 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 33-255 |
| Cow position: | chr20:12205936-12205727 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 33-259 |
| Cow position: | chr20:14735453-14735687 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 35-265 |
| Cow position: | chr20:22704066-22704310 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 159 |
| Conread position: | 36-246 |
| Cow position: | chr20:34918063-34918270 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 159, 13 |
| Conread position: | 36-252 |
| Cow position: | chr20:23936635-23936403 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 39-249 |
| Cow position: | chr20:5025520-5025303 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 43-253 |
| Cow position: | chr20:28296076-28296298 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 149 |
| Conread position: | 45-260 |
| Cow position: | chr20:6848410-6848637 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 47-255 |
| Cow position: | chr20:20983797-20984004 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 57-219 |
| Cow position: | chr20:11043694-11043531 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 118 |
| Conread position: | 57-265 |
| Cow position: | chr20:8020698-8020915 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 11 |
| Conread position: | 59-255 |
| Cow position: | chr20:21928710-21928912 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 87-258 |
| Cow position: | chr20:3321305-3321131 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 106-261 |
| Cow position: | chr20:5025091-5024932 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 120-259 |
| Cow position: | chr20:5636355-5636494 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 135-252 |
| Cow position: | chr20:22484747-22484867 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.