Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-235 |
| Cow position: | chr21:5566756-5567008 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 1-255 |
| Cow position: | chr21:37361709-37361448 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 1-258 |
| Cow position: | chr21:8985314-8985577 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 187 |
| Conread position: | 1-258 |
| Cow position: | chr21:13897958-13898216 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 1-259 |
| Cow position: | chr21:48484675-48484415 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 31 |
| Conread position: | 1-260 |
| Cow position: | chr21:26648239-26647978 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 1-266 |
| Cow position: | chr21:28734147-28733875 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 187 |
| Conread position: | 1-272 |
| Cow position: | chr21:40244199-40244484 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 58, 196 |
| Conread position: | 4-258 |
| Cow position: | chr21:39401368-39401625 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 135, 55 |
| Conread position: | 4-259 |
| Cow position: | chr21:937820-938058 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 4-265 |
| Cow position: | chr21:27743509-27743785 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 4-289 |
| Cow position: | chr21:34658802-34659092 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 6-206 |
| Cow position: | chr21:34254512-34254300 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 7-228 |
| Cow position: | chr21:2367111-2367335 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 7-244 |
| Cow position: | chr21:33419944-33419706 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 7-247 |
| Cow position: | chr21:7672904-7673140 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 7-254 |
| Cow position: | chr21:36795371-36795627 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 28, 184 |
| Conread position: | 7-254 |
| Cow position: | chr21:41878247-41878498 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 52, 100 |
| Conread position: | 7-255 |
| Cow position: | chr21:15445308-15445045 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-258 |
| Cow position: | chr21:42500802-42501070 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 192 |
| Conread position: | 7-259 |
| Cow position: | chr21:5344432-5344688 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 7-259 |
| Cow position: | chr21:33997454-33997197 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 31, 169 |
| Conread position: | 7-259 |
| Cow position: | chr21:34391199-34390943 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 7-264 |
| Cow position: | chr21:43357490-43357222 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 7-265 |
| Cow position: | chr21:36163192-36162924 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 255 |
| Conread position: | 7-266 |
| Cow position: | chr21:10727052-10727316 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 7-266 |
| Cow position: | chr21:23322310-23322039 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 8-259 |
| Cow position: | chr21:5455214-5454957 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 10-251 |
| Cow position: | chr21:33497-33745 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 11-258 |
| Cow position: | chr21:41155637-41155893 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 11-266 |
| Cow position: | chr21:28429225-28429480 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 13-259 |
| Cow position: | chr21:46849346-46849095 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 176 |
| Conread position: | 18-255 |
| Cow position: | chr21:31676284-31676525 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 23-259 |
| Cow position: | chr21:15584616-15584388 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 30-265 |
| Cow position: | chr21:17434527-17434280 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 162 |
| Conread position: | 32-180 |
| Cow position: | chr21:29248050-29247896 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 32-268 |
| Cow position: | chr21:24094948-24094704 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 32-272 |
| Cow position: | chr21:17674440-17674185 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 33-266 |
| Cow position: | chr21:30607288-30607050 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 127, 112 |
| Conread position: | 34-265 |
| Cow position: | chr21:5596943-5597188 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 179 |
| Conread position: | 37-265 |
| Cow position: | chr21:23586677-23586918 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 40-253 |
| Cow position: | chr21:26829437-26829232 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 160, 19 |
| Conread position: | 42-252 |
| Cow position: | chr21:31253341-31253569 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 42-263 |
| Cow position: | chr21:31277627-31277856 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 45-259 |
| Cow position: | chr21:5426755-5426973 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 142 |
| Conread position: | 46-266 |
| Cow position: | chr21:33791558-33791327 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 57-252 |
| Cow position: | chr21:9998896-9998692 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 11 |
| Conread position: | 57-259 |
| Cow position: | chr21:14452054-14452265 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 57-259 |
| Cow position: | chr21:18790732-18790527 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 74, 127 |
| Conread position: | 58-265 |
| Cow position: | chr21:32339912-32339700 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 70 |
| Conread position: | 62-259 |
| Cow position: | chr21:8235716-8235522 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 86, 95 |
| Conread position: | 65-255 |
| Cow position: | chr21:10000912-10001103 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 83, 45 |
| Conread position: | 68-261 |
| Cow position: | chr21:28244311-28244503 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 8 |
| Conread position: | 72-255 |
| Cow position: | chr21:28617429-28617617 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 79-265 |
| Cow position: | chr21:24642364-24642558 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 81-253 |
| Cow position: | chr21:11456962-11456782 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 87-273 |
| Cow position: | chr21:10005032-10004841 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 88-266 |
| Cow position: | chr21:957521-957711 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 98 |
| Conread position: | 95-255 |
| Cow position: | chr21:12462109-12461942 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 93 |
Show alignments to all cow chromosomes.