Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-196 |
| Cow position: | chr22:11814017-11813818 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 57, 47 |
| Conread position: | 1-253 |
| Cow position: | chr22:18196206-18196472 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 1-255 |
| Cow position: | chr22:15919937-15919669 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 58, 263 |
| Conread position: | 1-255 |
| Cow position: | chr22:16044731-16044458 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 1-255 |
| Cow position: | chr22:30514953-30515213 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 1-255 |
| Cow position: | chr22:44717418-44717673 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 1-258 |
| Cow position: | chr22:20626540-20626803 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 37 |
| Conread position: | 1-259 |
| Cow position: | chr22:7153580-7153851 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 153 |
| Conread position: | 1-260 |
| Cow position: | chr22:22861213-22860943 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 3-255 |
| Cow position: | chr22:27818700-27818964 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-259 |
| Cow position: | chr22:13840842-13841102 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 54 |
| Conread position: | 4-196 |
| Cow position: | chr22:8329250-8329449 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 58, 187 |
| Conread position: | 4-221 |
| Cow position: | chr22:2502539-2502763 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 4-254 |
| Cow position: | chr22:34726375-34726634 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-265 |
| Cow position: | chr22:13670466-13670201 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 7-244 |
| Cow position: | chr22:39494500-39494247 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 243 |
| Conread position: | 7-246 |
| Cow position: | chr22:6202617-6202868 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 52, 190 |
| Conread position: | 7-247 |
| Cow position: | chr22:16915426-16915180 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 52, 191 |
| Conread position: | 7-253 |
| Cow position: | chr22:41244946-41245204 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 7-255 |
| Cow position: | chr22:11211889-11211637 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 131, 50 |
| Conread position: | 7-255 |
| Cow position: | chr22:24575370-24575111 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 87 |
| Conread position: | 7-255 |
| Cow position: | chr22:26490163-26490422 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 186 |
| Conread position: | 7-255 |
| Cow position: | chr22:30698885-30699138 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 52, 43 |
| Conread position: | 7-258 |
| Cow position: | chr22:877227-877478 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 7-258 |
| Cow position: | chr22:16532770-16533039 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 202 |
| Conread position: | 7-258 |
| Cow position: | chr22:16620883-16621140 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 37 |
| Conread position: | 7-258 |
| Cow position: | chr22:26316183-26316435 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 62 |
| Conread position: | 7-258 |
| Cow position: | chr22:43292198-43291932 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 189 |
| Conread position: | 7-259 |
| Cow position: | chr22:3949945-3950217 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 195 |
| Conread position: | 7-260 |
| Cow position: | chr22:10920157-10919887 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 7-260 |
| Cow position: | chr22:14844270-14844534 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 7-263 |
| Cow position: | chr22:5467664-5467398 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 119 |
| Conread position: | 7-266 |
| Cow position: | chr22:37817469-37817729 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 133, 18 |
| Conread position: | 7-266 |
| Cow position: | chr22:40374310-40374581 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 187 |
| Conread position: | 8-247 |
| Cow position: | chr22:11500487-11500734 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 138, 63 |
| Conread position: | 8-258 |
| Cow position: | chr22:46568184-46567924 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-258 |
| Cow position: | chr22:26106764-26107022 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 49, 181 |
| Conread position: | 9-265 |
| Cow position: | chr22:7302139-7301860 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 10-285 |
| Cow position: | chr22:30472753-30473037 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 12-253 |
| Cow position: | chr22:14925013-14924773 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 12-255 |
| Cow position: | chr22:11778903-11778649 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 12-260 |
| Cow position: | chr22:14143397-14143146 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 119 |
| Conread position: | 12-260 |
| Cow position: | chr22:41045205-41044945 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 13-258 |
| Cow position: | chr22:17813939-17814190 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 18-258 |
| Cow position: | chr22:13769195-13769434 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 23-172 |
| Cow position: | chr22:37087594-37087444 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 24-259 |
| Cow position: | chr22:1975334-1975577 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 25-258 |
| Cow position: | chr22:5042041-5042282 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 165 |
| Conread position: | 31-207 |
| Cow position: | chr22:36208670-36208853 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 31-265 |
| Cow position: | chr22:29013607-29013850 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 32-259 |
| Cow position: | chr22:14601242-14601469 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 105 |
| Conread position: | 32-266 |
| Cow position: | chr22:19048074-19047845 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 32-275 |
| Cow position: | chr22:40048292-40048535 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 33-254 |
| Cow position: | chr22:34750407-34750636 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 33-258 |
| Cow position: | chr22:29955269-29955035 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 33-259 |
| Cow position: | chr22:25341750-25341984 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 24, 158 |
| Conread position: | 35-265 |
| Cow position: | chr22:29641841-29642084 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 36-255 |
| Cow position: | chr22:26141007-26141237 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 39-259 |
| Cow position: | chr22:38980643-38980862 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 86 |
| Conread position: | 39-266 |
| Cow position: | chr22:534229-534471 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 158 |
| Conread position: | 41-253 |
| Cow position: | chr22:28731424-28731634 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 43-215 |
| Cow position: | chr22:38313724-38313541 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 43-258 |
| Cow position: | chr22:31593121-31592894 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 151 |
| Conread position: | 45-259 |
| Cow position: | chr22:34606335-34606549 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 113, 48 |
| Conread position: | 47-265 |
| Cow position: | chr22:3253189-3252984 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 50-252 |
| Cow position: | chr22:26658805-26659012 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 86, 137 |
| Conread position: | 50-258 |
| Cow position: | chr22:37324297-37324507 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 57-258 |
| Cow position: | chr22:25222144-25221936 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 82, 11 |
| Conread position: | 59-259 |
| Cow position: | chr22:4026367-4026571 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 59-260 |
| Cow position: | chr22:23403882-23403682 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 99, 115 |
| Conread position: | 62-259 |
| Cow position: | chr22:1640547-1640334 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 63-258 |
| Cow position: | chr22:20687056-20687268 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 63-259 |
| Cow position: | chr22:25630008-25629797 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 134 |
| Conread position: | 65-258 |
| Cow position: | chr22:25237376-25237183 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 132, 86 |
| Conread position: | 82-259 |
| Cow position: | chr22:3944956-3945141 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 121-260 |
| Cow position: | chr22:12388918-12389063 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.