Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-255 |
| Cow position: | chr27:23930219-23929968 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 58, 144 |
| Conread position: | 1-255 |
| Cow position: | chr27:28921644-28921905 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 1-255 |
| Cow position: | chr27:30868485-30868748 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 1-265 |
| Cow position: | chr27:31372725-31372996 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 1-266 |
| Cow position: | chr27:4385810-4386080 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 58, 158 |
| Conread position: | 1-266 |
| Cow position: | chr27:28189962-28190233 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 58, 191 |
| Conread position: | 3-258 |
| Cow position: | chr27:27843738-27844006 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 5, 192 |
| Conread position: | 3-266 |
| Cow position: | chr27:31147420-31147688 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 4-255 |
| Cow position: | chr27:15315741-15315498 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 4-258 |
| Cow position: | chr27:25791064-25790792 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 195 |
| Conread position: | 5-265 |
| Cow position: | chr27:24227542-24227812 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 217 |
| Conread position: | 7-221 |
| Cow position: | chr27:1294169-1294388 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 169 |
| Conread position: | 7-254 |
| Cow position: | chr27:24331978-24331714 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-258 |
| Cow position: | chr27:15867636-15867386 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 50 |
| Conread position: | 7-259 |
| Cow position: | chr27:1768389-1768633 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 7-259 |
| Cow position: | chr27:15925583-15925329 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 7-266 |
| Cow position: | chr27:11255762-11255501 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 8-266 |
| Cow position: | chr27:16238144-16237892 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 109 |
| Conread position: | 9-255 |
| Cow position: | chr27:28518532-28518287 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 9-259 |
| Cow position: | chr27:22418520-22418779 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 14-271 |
| Cow position: | chr27:536699-536442 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 17-254 |
| Cow position: | chr27:14902410-14902659 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 168 |
| Conread position: | 23-258 |
| Cow position: | chr27:17473046-17472798 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 27-253 |
| Cow position: | chr27:27640760-27641007 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 5, 244 |
| Conread position: | 29-260 |
| Cow position: | chr27:23554096-23554343 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 111, 28 |
| Conread position: | 32-266 |
| Cow position: | chr27:28001599-28001829 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 165, 7 |
| Conread position: | 33-255 |
| Cow position: | chr27:30765255-30765028 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 26, 144 |
| Conread position: | 33-259 |
| Cow position: | chr27:6523269-6523026 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 33-265 |
| Cow position: | chr27:12596980-12596748 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 33-266 |
| Cow position: | chr27:19661166-19660916 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 34-258 |
| Cow position: | chr27:1183654-1183888 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 35-260 |
| Cow position: | chr27:2592762-2592535 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 36-260 |
| Cow position: | chr27:26218915-26218693 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 37-260 |
| Cow position: | chr27:30354126-30354356 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 40-270 |
| Cow position: | chr27:2682927-2683167 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 151 |
| Conread position: | 41-260 |
| Cow position: | chr27:18558579-18558346 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 50-253 |
| Cow position: | chr27:20354783-20354578 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 50-255 |
| Cow position: | chr27:29251083-29250870 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 159 |
| Conread position: | 57-255 |
| Cow position: | chr27:6037318-6037115 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 79-259 |
| Cow position: | chr27:9169470-9169657 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 62, 110 |
| Conread position: | 98-259 |
| Cow position: | chr27:23891093-23890927 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 116-255 |
| Cow position: | chr27:6350700-6350845 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 18 |
Show alignments to all cow chromosomes.