Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-258 |
| Cow position: | chr28:5826655-5826924 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 58, 130 |
| Conread position: | 1-264 |
| Cow position: | chr28:15044149-15043884 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 1-266 |
| Cow position: | chr28:9390658-9390384 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 190 |
| Conread position: | 3-264 |
| Cow position: | chr28:4308189-4307925 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 4-254 |
| Cow position: | chr28:18354606-18354355 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 4-258 |
| Cow position: | chr28:22171009-22170743 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 4-259 |
| Cow position: | chr28:2124149-2124402 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 137, 51 |
| Conread position: | 4-259 |
| Cow position: | chr28:8347432-8347705 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 55, 195 |
| Conread position: | 7-175 |
| Cow position: | chr28:12964290-12964460 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 7-221 |
| Cow position: | chr28:5805232-5805453 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 7-234 |
| Cow position: | chr28:31872034-31871797 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 94 |
| Conread position: | 7-253 |
| Cow position: | chr28:13267494-13267754 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 7-255 |
| Cow position: | chr28:26922659-26922397 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 7-255 |
| Cow position: | chr28:34082305-34082047 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 7-259 |
| Cow position: | chr28:19295649-19295386 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 7-259 |
| Cow position: | chr28:23008015-23007760 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 7-265 |
| Cow position: | chr28:10606899-10606648 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 161, 43 |
| Conread position: | 7-265 |
| Cow position: | chr28:21598540-21598274 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 7-266 |
| Cow position: | chr28:9426629-9426372 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 7-266 |
| Cow position: | chr28:21380594-21380860 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 8-251 |
| Cow position: | chr28:7228670-7228419 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 8-255 |
| Cow position: | chr28:7684963-7684713 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 83 |
| Conread position: | 9-259 |
| Cow position: | chr28:20312989-20313249 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 12-258 |
| Cow position: | chr28:7590466-7590208 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 183 |
| Conread position: | 17-265 |
| Cow position: | chr28:23839931-23840181 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 19-260 |
| Cow position: | chr28:15263999-15263742 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 20-259 |
| Cow position: | chr28:27218048-27218298 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 23-254 |
| Cow position: | chr28:23675873-23676107 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 23-255 |
| Cow position: | chr28:34878244-34878000 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 36, 170 |
| Conread position: | 23-259 |
| Cow position: | chr28:23410596-23410351 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 23-264 |
| Cow position: | chr28:17287953-17288197 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 35, 137 |
| Conread position: | 26-259 |
| Cow position: | chr28:8408474-8408708 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 32-259 |
| Cow position: | chr28:24996851-24996615 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 32-260 |
| Cow position: | chr28:16244021-16243784 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 151 |
| Conread position: | 33-237 |
| Cow position: | chr28:15688780-15688992 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 33-252 |
| Cow position: | chr28:26719099-26719317 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 37-265 |
| Cow position: | chr28:24343109-24343350 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 42-247 |
| Cow position: | chr28:16386758-16386546 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 44-255 |
| Cow position: | chr28:28076654-28076440 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 44-266 |
| Cow position: | chr28:22321172-22321407 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 150 |
| Conread position: | 45-247 |
| Cow position: | chr28:2898746-2898960 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 50-265 |
| Cow position: | chr28:11423045-11422836 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 108, 38 |
| Conread position: | 61-260 |
| Cow position: | chr28:12951202-12951404 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 76, 115 |
| Conread position: | 62-254 |
| Cow position: | chr28:8656965-8656772 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 64-260 |
| Cow position: | chr28:10053566-10053358 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 55, 131 |
| Conread position: | 65-263 |
| Cow position: | chr28:10478571-10478367 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 8, 130 |
| Conread position: | 66-180 |
| Cow position: | chr28:5074729-5074614 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 6 |
| Conread position: | 116-259 |
| Cow position: | chr28:25728030-25728173 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 135-255 |
| Cow position: | chr28:19023986-19024110 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 135-259 |
| Cow position: | chr28:26982893-26982763 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.