Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-221 |
| Cow position: | chr29:10456852-10456630 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 62, 175 |
| Conread position: | 1-230 |
| Cow position: | chr29:26519761-26519523 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 58, 122 |
| Conread position: | 1-253 |
| Cow position: | chr29:16657391-16657651 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 140, 79 |
| Conread position: | 1-255 |
| Cow position: | chr29:20626277-20626539 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 63, 188 |
| Conread position: | 1-258 |
| Cow position: | chr29:28195816-28195547 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 4-255 |
| Cow position: | chr29:45589882-45589628 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 127 |
| Conread position: | 4-258 |
| Cow position: | chr29:29551026-29551282 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 5-259 |
| Cow position: | chr29:32800003-32799741 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 7-220 |
| Cow position: | chr29:35501939-35501723 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 7-253 |
| Cow position: | chr29:12005058-12004800 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 7-255 |
| Cow position: | chr29:2644602-2644340 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 7-255 |
| Cow position: | chr29:7041129-7040881 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 97 |
| Conread position: | 7-255 |
| Cow position: | chr29:12798638-12798882 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 7-255 |
| Cow position: | chr29:13372372-13372628 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 7-255 |
| Cow position: | chr29:37292477-37292742 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 183 |
| Conread position: | 7-255 |
| Cow position: | chr29:39567392-39567650 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 7-259 |
| Cow position: | chr29:9686303-9686035 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 190 |
| Conread position: | 7-259 |
| Cow position: | chr29:24952392-24952655 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 7-260 |
| Cow position: | chr29:28775748-28775492 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 152 |
| Conread position: | 9-246 |
| Cow position: | chr29:26771149-26771388 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 10-260 |
| Cow position: | chr29:3395822-3396073 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 10-265 |
| Cow position: | chr29:17668215-17668462 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 127, 23 |
| Conread position: | 11-223 |
| Cow position: | chr29:36633124-36632910 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 12-265 |
| Cow position: | chr29:699898-699646 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 22-175 |
| Cow position: | chr29:36356572-36356732 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 23-252 |
| Cow position: | chr29:39111586-39111355 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 23-255 |
| Cow position: | chr29:19907078-19907318 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 26-255 |
| Cow position: | chr29:4065814-4066048 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 33-223 |
| Cow position: | chr29:21933381-21933181 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 34-258 |
| Cow position: | chr29:22069014-22068780 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 35-255 |
| Cow position: | chr29:94811-94591 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 35-267 |
| Cow position: | chr29:22175427-22175662 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 91, 129 |
| Conread position: | 37-252 |
| Cow position: | chr29:5919589-5919362 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 175 |
| Conread position: | 37-252 |
| Cow position: | chr29:29769610-29769392 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 37-259 |
| Cow position: | chr29:41530588-41530814 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 38-266 |
| Cow position: | chr29:40891965-40891722 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 160 |
| Conread position: | 40-148 |
| Cow position: | chr29:629375-629482 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 41-253 |
| Cow position: | chr29:18212242-18212032 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 44-255 |
| Cow position: | chr29:32767774-32767560 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 45-259 |
| Cow position: | chr29:32963298-32963523 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 154 |
| Conread position: | 50-258 |
| Cow position: | chr29:4194369-4194151 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 59-258 |
| Cow position: | chr29:11915577-11915786 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 148 |
| Conread position: | 61-265 |
| Cow position: | chr29:4520098-4520308 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 78, 126 |
| Conread position: | 62-258 |
| Cow position: | chr29:36183039-36183247 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 65-255 |
| Cow position: | chr29:19254056-19253857 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 70-260 |
| Cow position: | chr29:19821068-19821255 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 69 |
| Conread position: | 78-273 |
| Cow position: | chr29:463874-463676 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 115 |
| Conread position: | 82-254 |
| Cow position: | chr29:31489103-31489282 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 83-259 |
| Cow position: | chr29:22778397-22778210 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 109 |
| Conread position: | 106-255 |
| Cow position: | chr29:12025658-12025507 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 78 |
Show alignments to all cow chromosomes.