Cow genome map

Conread name: rcbe26_b12.y1

Conread position: 1-255
Cow position: chr3:2483134-2483387 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 57, 24

Conread position: 1-255
Cow position: chr3:3164815-3164556 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 24

Conread position: 1-255
Cow position: chr3:7566738-7566484 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 19

Conread position: 1-255
Cow position: chr3:22872374-22872106 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 1-255
Cow position: chr3:42177838-42178099 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 187

Conread position: 1-255
Cow position: chr3:53150004-53150268 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 184

Conread position: 1-258
Cow position: chr3:5365363-5365621 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 33, 128

Conread position: 1-258
Cow position: chr3:79208313-79208054 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 40

Conread position: 1-259
Cow position: chr3:15052264-15052007 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 61

Conread position: 1-260
Cow position: chr3:79292513-79292775 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 34

Conread position: 1-264
Cow position: chr3:14466026-14465764 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 106

Conread position: 1-265
Cow position: chr3:17952334-17952607 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 189

Conread position: 1-265
Cow position: chr3:39328090-39328346 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 96

Conread position: 2-255
Cow position: chr3:4031644-4031911 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 198

Conread position: 2-255
Cow position: chr3:46900875-46901138 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 7

Conread position: 3-265
Cow position: chr3:53384603-53384334 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 178

Conread position: 4-221
Cow position: chr3:53903870-53904092 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 21

Conread position: 4-255
Cow position: chr3:79592207-79591941 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 55, 21

Conread position: 4-258
Cow position: chr3:2506798-2506532 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 190

Conread position: 4-258
Cow position: chr3:18066815-18067079 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 180

Conread position: 4-259
Cow position: chr3:75727908-75727638 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 5-259
Cow position: chr3:34270616-34270860 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 20

Conread position: 7-220
Cow position: chr3:78782658-78782870 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 82

Conread position: 7-247
Cow position: chr3:54782327-54782085 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 25

Conread position: 7-252
Cow position: chr3:72390767-72391023 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 38, 54

Conread position: 7-253
Cow position: chr3:74088477-74088232 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 135, 45

Conread position: 7-254
Cow position: chr3:33633202-33632952 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 128

Conread position: 7-255
Cow position: chr3:2393288-2393022 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 194

Conread position: 7-255
Cow position: chr3:18459836-18459581 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 181

Conread position: 7-255
Cow position: chr3:27544650-27544392 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 38, 15

Conread position: 7-255
Cow position: chr3:49218623-49218373 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 64

Conread position: 7-256
Cow position: chr3:72675771-72676034 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 181

Conread position: 7-258
Cow position: chr3:49650064-49650328 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 51, 64

Conread position: 7-258
Cow position: chr3:59596889-59597127 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 8

Conread position: 7-258
Cow position: chr3:67704220-67704486 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 182

Conread position: 7-259
Cow position: chr3:28898544-28898276 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 28, 0

Conread position: 7-259
Cow position: chr3:48296395-48296654 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 183

Conread position: 7-260
Cow position: chr3:31903424-31903168 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 197

Conread position: 7-265
Cow position: chr3:1830881-1830624 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 93

Conread position: 7-265
Cow position: chr3:59451279-59451540 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 66

Conread position: 7-266
Cow position: chr3:80082133-80081871 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 52, 76

Conread position: 7-270
Cow position: chr3:68586725-68586977 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 18

Conread position: 8-253
Cow position: chr3:69751016-69750764 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 51, 197

Conread position: 8-254
Cow position: chr3:59271244-59271480 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 51

Conread position: 8-259
Cow position: chr3:65058387-65058646 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 63

Conread position: 8-266
Cow position: chr3:82460868-82461130 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 130

Conread position: 9-218
Cow position: chr3:38346889-38347107 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 23

Conread position: 9-244
Cow position: chr3:71497460-71497214 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 50, 187

Conread position: 9-255
Cow position: chr3:5101074-5100826 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 9-259
Cow position: chr3:71231092-71231343 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 128

Conread position: 9-266
Cow position: chr3:14626464-14626205 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 175

Conread position: 9-272
Cow position: chr3:53270511-53270787 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 14, 185

Conread position: 10-260
Cow position: chr3:44535073-44534814 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 50

Conread position: 13-255
Cow position: chr3:65968845-65969102 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 58

Conread position: 13-266
Cow position: chr3:37041118-37041366 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 7, 134

Conread position: 15-260
Cow position: chr3:35975413-35975162 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 173

Conread position: 17-258
Cow position: chr3:53739499-53739242 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 180

Conread position: 18-258
Cow position: chr3:70401598-70401845 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 41, 53

Conread position: 23-196
Cow position: chr3:48852266-48852081 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 57

Conread position: 23-258
Cow position: chr3:54959891-54960132 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 48

Conread position: 31-253
Cow position: chr3:44932222-44932451 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 108, 7

Conread position: 32-258
Cow position: chr3:20437934-20437708 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 37

Conread position: 32-259
Cow position: chr3:54862715-54862470 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 186

Conread position: 32-264
Cow position: chr3:65413566-65413331 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 39

Conread position: 32-289
Cow position: chr3:18854802-18855071 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 33-177
Cow position: chr3:19822256-19822108 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 33-255
Cow position: chr3:58540820-58540586 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 108, 159

Conread position: 33-259
Cow position: chr3:23471758-23471522 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 153

Conread position: 33-266
Cow position: chr3:5096913-5097158 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 35-247
Cow position: chr3:56704825-56704611 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 103

Conread position: 35-252
Cow position: chr3:23876710-23876932 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 154

Conread position: 35-259
Cow position: chr3:38691692-38691462 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 8

Conread position: 39-244
Cow position: chr3:364503-364282 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 42-253
Cow position: chr3:51234371-51234156 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 11

Conread position: 42-255
Cow position: chr3:77365575-77365357 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 17, 79

Conread position: 43-258
Cow position: chr3:55124558-55124340 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 149

Conread position: 43-259
Cow position: chr3:57763943-57764171 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 151

Conread position: 43-259
Cow position: chr3:75158085-75158304 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 15, 134

Conread position: 44-260
Cow position: chr3:49731916-49731695 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 15, 120

Conread position: 44-266
Cow position: chr3:44101702-44101923 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 75

Conread position: 45-255
Cow position: chr3:68627953-68627746 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 118

Conread position: 46-255
Cow position: chr3:73394843-73395062 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 13

Conread position: 57-241
Cow position: chr3:59701750-59701936 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 103, 77

Conread position: 58-259
Cow position: chr3:57624201-57624409 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 22, 133

Conread position: 62-254
Cow position: chr3:8604272-8604074 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 143

Conread position: 62-265
Cow position: chr3:4087424-4087213 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 81, 0

Conread position: 64-247
Cow position: chr3:23269846-23270031 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 109

Conread position: 68-255
Cow position: chr3:41328203-41328387 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 106

Conread position: 72-259
Cow position: chr3:2680263-2680461 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 123

Conread position: 81-266
Cow position: chr3:80922329-80922529 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 108

Conread position: 98-251
Cow position: chr3:49140259-49140105 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 77

Conread position: 126-258
Cow position: chr3:78739667-78739799 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 58

Show alignments to all cow chromosomes.