Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-252 |
| Cow position: | chr4:56240152-56239901 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 193 |
| Conread position: | 1-258 |
| Cow position: | chr4:10055905-10056171 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 58, 154 |
| Conread position: | 1-259 |
| Cow position: | chr4:509204-508947 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 58, 185 |
| Conread position: | 1-260 |
| Cow position: | chr4:27276849-27276583 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 190 |
| Conread position: | 1-264 |
| Cow position: | chr4:12048942-12049211 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 1-265 |
| Cow position: | chr4:19313699-19313978 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 1-265 |
| Cow position: | chr4:34166271-34166010 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 132, 22 |
| Conread position: | 3-261 |
| Cow position: | chr4:43543038-43542773 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 56, 211 |
| Conread position: | 3-266 |
| Cow position: | chr4:14414648-14414376 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 4-253 |
| Cow position: | chr4:65815995-65815750 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 131 |
| Conread position: | 4-255 |
| Cow position: | chr4:10905760-10905508 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 4-255 |
| Cow position: | chr4:11099968-11099712 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 130, 53 |
| Conread position: | 4-258 |
| Cow position: | chr4:45738782-45738519 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 4-260 |
| Cow position: | chr4:22051771-22051512 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 4-260 |
| Cow position: | chr4:54501752-54501487 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 54, 169 |
| Conread position: | 4-264 |
| Cow position: | chr4:68944479-68944207 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 210 |
| Conread position: | 5-255 |
| Cow position: | chr4:61972775-61972504 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 7-196 |
| Cow position: | chr4:4736737-4736927 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 7-247 |
| Cow position: | chr4:22073611-22073366 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 7-247 |
| Cow position: | chr4:67444845-67445096 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 7-255 |
| Cow position: | chr4:8439743-8439481 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-255 |
| Cow position: | chr4:61215298-61215040 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-258 |
| Cow position: | chr4:44782074-44782333 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 171 |
| Conread position: | 7-259 |
| Cow position: | chr4:20626-20879 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 7-259 |
| Cow position: | chr4:23853903-23854151 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 19, 154 |
| Conread position: | 7-259 |
| Cow position: | chr4:25879097-25879359 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 7-259 |
| Cow position: | chr4:48137614-48137872 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 7-259 |
| Cow position: | chr4:68764217-68764484 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 91 |
| Conread position: | 7-265 |
| Cow position: | chr4:15904801-15905065 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 7-265 |
| Cow position: | chr4:30574156-30574416 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 7-265 |
| Cow position: | chr4:51903302-51903569 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 253 |
| Conread position: | 7-266 |
| Cow position: | chr4:30974037-30974309 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 55, 186 |
| Conread position: | 7-266 |
| Cow position: | chr4:49424544-49424794 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 8-221 |
| Cow position: | chr4:53208005-53208217 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 8-247 |
| Cow position: | chr4:53545730-53545977 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 172 |
| Conread position: | 8-255 |
| Cow position: | chr4:65891693-65891949 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 124 |
| Conread position: | 8-266 |
| Cow position: | chr4:14919712-14919962 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 135, 45 |
| Conread position: | 9-258 |
| Cow position: | chr4:11671155-11671414 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 9-259 |
| Cow position: | chr4:22236773-22236519 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 145 |
| Conread position: | 9-259 |
| Cow position: | chr4:54190801-54191050 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 11-221 |
| Cow position: | chr4:10703981-10703759 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 49, 202 |
| Conread position: | 11-252 |
| Cow position: | chr4:12003927-12004179 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 187 |
| Conread position: | 11-258 |
| Cow position: | chr4:45589883-45589641 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 12-270 |
| Cow position: | chr4:43370145-43369881 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 178 |
| Conread position: | 13-266 |
| Cow position: | chr4:2609944-2610199 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 86 |
| Conread position: | 14-259 |
| Cow position: | chr4:57555673-57555932 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 158 |
| Conread position: | 18-266 |
| Cow position: | chr4:39128242-39128502 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 19-255 |
| Cow position: | chr4:56570515-56570764 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 15, 174 |
| Conread position: | 21-266 |
| Cow position: | chr4:17474151-17474407 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 27-266 |
| Cow position: | chr4:4321286-4321033 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 32, 171 |
| Conread position: | 31-258 |
| Cow position: | chr4:8801227-8801467 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 31-266 |
| Cow position: | chr4:15439321-15439546 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 32-204 |
| Cow position: | chr4:40576191-40576015 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 32-251 |
| Cow position: | chr4:52748733-52748505 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 27, 158 |
| Conread position: | 33-233 |
| Cow position: | chr4:28772341-28772133 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 33-252 |
| Cow position: | chr4:51739977-51739755 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 26, 144 |
| Conread position: | 33-253 |
| Cow position: | chr4:44612729-44612959 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 159 |
| Conread position: | 33-254 |
| Cow position: | chr4:62570541-62570774 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 144 |
| Conread position: | 33-259 |
| Cow position: | chr4:54930690-54930459 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 33-260 |
| Cow position: | chr4:57931637-57931875 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 39-255 |
| Cow position: | chr4:46597115-46597335 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 41-253 |
| Cow position: | chr4:54667957-54667733 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 17, 154 |
| Conread position: | 42-274 |
| Cow position: | chr4:34641994-34641752 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 43-258 |
| Cow position: | chr4:32725960-32726186 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 151 |
| Conread position: | 44-255 |
| Cow position: | chr4:12560777-12560985 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 111, 17 |
| Conread position: | 44-260 |
| Cow position: | chr4:23445314-23445087 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 50-203 |
| Cow position: | chr4:19708687-19708846 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 50-259 |
| Cow position: | chr4:42922100-42921893 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 108, 139 |
| Conread position: | 51-254 |
| Cow position: | chr4:31004657-31004451 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 51-255 |
| Cow position: | chr4:52167099-52166896 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 57-255 |
| Cow position: | chr4:29291275-29291476 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 57-260 |
| Cow position: | chr4:43909505-43909705 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 140, 71 |
| Conread position: | 58-240 |
| Cow position: | chr4:26307746-26307557 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 62 |
| Conread position: | 58-247 |
| Cow position: | chr4:53447912-53447719 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 60-259 |
| Cow position: | chr4:34383581-34383382 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 69-254 |
| Cow position: | chr4:25359376-25359566 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 71-259 |
| Cow position: | chr4:21258983-21259177 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 131 |
| Conread position: | 74-259 |
| Cow position: | chr4:13222406-13222222 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 107 |
| Conread position: | 75-259 |
| Cow position: | chr4:22860935-22860752 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 83, 121 |
| Conread position: | 76-258 |
| Cow position: | chr4:13255865-13256048 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 54 |
| Conread position: | 79-254 |
| Cow position: | chr4:37465809-37465635 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 80-255 |
| Cow position: | chr4:44973418-44973594 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 86-259 |
| Cow position: | chr4:38935140-38935317 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 98-255 |
| Cow position: | chr4:51768906-51769068 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 92 |
Show alignments to all cow chromosomes.