Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-237 |
| Cow position: | chr6:6642847-6642614 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 121, 104 |
| Conread position: | 1-254 |
| Cow position: | chr6:54369155-54368898 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 1-258 |
| Cow position: | chr6:16700003-16700272 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 1-259 |
| Cow position: | chr6:16737762-16738028 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 1-260 |
| Cow position: | chr6:42565427-42565698 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 1-265 |
| Cow position: | chr6:67950702-67950966 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 4-259 |
| Cow position: | chr6:33302154-33302420 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 4-270 |
| Cow position: | chr6:3952269-3952537 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 144, 172 |
| Conread position: | 5-260 |
| Cow position: | chr6:34075772-34076036 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 7-221 |
| Cow position: | chr6:55608059-55607842 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 53, 141 |
| Conread position: | 7-252 |
| Cow position: | chr6:9008860-9008610 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 7-255 |
| Cow position: | chr6:10332359-10332087 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 267 |
| Conread position: | 7-255 |
| Cow position: | chr6:44078263-44078521 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 38, 201 |
| Conread position: | 7-259 |
| Cow position: | chr6:31635940-31635684 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 7-259 |
| Cow position: | chr6:35103577-35103325 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 7-260 |
| Cow position: | chr6:5958269-5958017 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 132, 61 |
| Conread position: | 7-260 |
| Cow position: | chr6:10176551-10176287 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 7-264 |
| Cow position: | chr6:54365576-54365318 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 7-265 |
| Cow position: | chr6:47540273-47540545 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 52, 181 |
| Conread position: | 7-266 |
| Cow position: | chr6:35181506-35181246 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 8-210 |
| Cow position: | chr6:54140566-54140769 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 13-196 |
| Cow position: | chr6:12845070-12845255 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 156 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 13-253 |
| Cow position: | chr6:12927873-12928121 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 46, 182 |
| Conread position: | 13-255 |
| Cow position: | chr6:56849771-56850016 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 14-273 |
| Cow position: | chr6:2423503-2423765 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 17-251 |
| Cow position: | chr6:561373-561624 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 199 |
| Conread position: | 19-268 |
| Cow position: | chr6:7103476-7103210 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 23-259 |
| Cow position: | chr6:6264407-6264649 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 29-266 |
| Cow position: | chr6:29239712-29239955 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 160 |
| Conread position: | 32-254 |
| Cow position: | chr6:4383265-4383488 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 32-259 |
| Cow position: | chr6:68049208-68049440 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 33-255 |
| Cow position: | chr6:38218445-38218673 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 33-255 |
| Cow position: | chr6:45065233-45065012 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 33-259 |
| Cow position: | chr6:6995171-6994946 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 153 |
| Conread position: | 33-259 |
| Cow position: | chr6:17090372-17090607 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 35 |
| Conread position: | 33-259 |
| Cow position: | chr6:38440955-38441184 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 33-259 |
| Cow position: | chr6:66874135-66874358 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 33-265 |
| Cow position: | chr6:49685358-49685598 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 25, 142 |
| Conread position: | 33-266 |
| Cow position: | chr6:52025878-52025637 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 34-259 |
| Cow position: | chr6:14850937-14850706 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 35-273 |
| Cow position: | chr6:19401637-19401882 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 40-255 |
| Cow position: | chr6:35435783-35435996 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 43-259 |
| Cow position: | chr6:48344111-48344340 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 153 |
| Conread position: | 45-266 |
| Cow position: | chr6:30786363-30786140 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 147 |
| Conread position: | 46-264 |
| Cow position: | chr6:65702615-65702391 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 48-255 |
| Cow position: | chr6:57405336-57405119 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 50-270 |
| Cow position: | chr6:54864873-54864650 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 51-259 |
| Cow position: | chr6:53519829-53519614 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 90, 128 |
| Conread position: | 57-266 |
| Cow position: | chr6:38641298-38641509 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 82, 144 |
| Conread position: | 58-255 |
| Cow position: | chr6:33276840-33277045 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 59-288 |
| Cow position: | chr6:53139127-53138877 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 61-177 |
| Cow position: | chr6:10237175-10237292 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 61-196 |
| Cow position: | chr6:36011499-36011633 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 64-259 |
| Cow position: | chr6:28318216-28318412 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 95 |
| Conread position: | 76-256 |
| Cow position: | chr6:32518054-32517864 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 78-259 |
| Cow position: | chr6:18968952-18968772 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 87-259 |
| Cow position: | chr6:12668937-12669110 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 88-260 |
| Cow position: | chr6:11246595-11246772 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 94-254 |
| Cow position: | chr6:14914402-14914238 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 104-244 |
| Cow position: | chr6:57298867-57299011 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 72 |
Show alignments to all cow chromosomes.