Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-221 |
| Cow position: | chr7:20534625-20534848 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 138, 58 |
| Conread position: | 1-241 |
| Cow position: | chr7:23472078-23471828 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 1-247 |
| Cow position: | chr7:23099290-23099045 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 1-254 |
| Cow position: | chr7:63085308-63085563 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 1-255 |
| Cow position: | chr7:22357745-22357478 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 1-255 |
| Cow position: | chr7:25512378-25512116 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 32, 189 |
| Conread position: | 1-255 |
| Cow position: | chr7:63771646-63771913 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 1-260 |
| Cow position: | chr7:52718898-52718625 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 36, 196 |
| Conread position: | 1-266 |
| Cow position: | chr7:47932053-47931780 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-255 |
| Cow position: | chr7:33804723-33804972 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 4-230 |
| Cow position: | chr7:58967021-58967252 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 55, 173 |
| Conread position: | 4-282 |
| Cow position: | chr7:4138974-4138701 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 5-179 |
| Cow position: | chr7:98369-98190 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-221 |
| Cow position: | chr7:59030748-59030963 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 7-236 |
| Cow position: | chr7:39105598-39105357 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-250 |
| Cow position: | chr7:58170490-58170740 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 185 |
| Conread position: | 7-255 |
| Cow position: | chr7:32824503-32824249 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 7-258 |
| Cow position: | chr7:9136591-9136843 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 7-258 |
| Cow position: | chr7:39149686-39149951 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 194 |
| Conread position: | 7-259 |
| Cow position: | chr7:4418710-4418451 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 7-259 |
| Cow position: | chr7:21649852-21650113 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 7-260 |
| Cow position: | chr7:57259281-57259016 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 170 |
| Conread position: | 7-264 |
| Cow position: | chr7:44590093-44589835 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 103, 34 |
| Conread position: | 7-265 |
| Cow position: | chr7:42431574-42431845 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 7-266 |
| Cow position: | chr7:34428310-34428590 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 265 |
| Conread position: | 7-266 |
| Cow position: | chr7:39042353-39042615 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 52, 184 |
| Conread position: | 7-266 |
| Cow position: | chr7:65122091-65122360 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 176 |
| Conread position: | 7-270 |
| Cow position: | chr7:20415554-20415281 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 8-253 |
| Cow position: | chr7:15654324-15654071 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 8-255 |
| Cow position: | chr7:59713219-59713477 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 8-267 |
| Cow position: | chr7:53361626-53361366 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 51, 182 |
| Conread position: | 9-258 |
| Cow position: | chr7:27283431-27283692 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 49, 6 |
| Conread position: | 12-266 |
| Cow position: | chr7:3283119-3283382 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 12-266 |
| Cow position: | chr7:52776999-52776739 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 53, 168 |
| Conread position: | 13-264 |
| Cow position: | chr7:21526650-21526392 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 46, 196 |
| Conread position: | 14-255 |
| Cow position: | chr7:53612900-53613147 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 19-237 |
| Cow position: | chr7:32693289-32693060 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 134 |
| Conread position: | 19-260 |
| Cow position: | chr7:41293988-41293736 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 20-266 |
| Cow position: | chr7:34422499-34422251 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 22-260 |
| Cow position: | chr7:39988173-39988416 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 23-259 |
| Cow position: | chr7:41328266-41328030 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 23-259 |
| Cow position: | chr7:49942657-49942417 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 115, 48 |
| Conread position: | 25-175 |
| Cow position: | chr7:25496511-25496661 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 26-259 |
| Cow position: | chr7:63113002-63112766 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 6 |
| Conread position: | 27-264 |
| Cow position: | chr7:42460203-42460450 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 152 |
| Conread position: | 31-258 |
| Cow position: | chr7:600115-600344 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 32-244 |
| Cow position: | chr7:17782898-17782683 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 32-258 |
| Cow position: | chr7:45658610-45658378 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 47, 157 |
| Conread position: | 33-236 |
| Cow position: | chr7:24767447-24767243 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 125, 150 |
| Conread position: | 33-252 |
| Cow position: | chr7:25860413-25860191 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 33-258 |
| Cow position: | chr7:14712414-14712193 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 129, 5 |
| Conread position: | 33-259 |
| Cow position: | chr7:41445137-41445370 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 35-251 |
| Cow position: | chr7:27349447-27349228 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 35-255 |
| Cow position: | chr7:31881465-31881683 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 37-247 |
| Cow position: | chr7:32791473-32791702 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 37-259 |
| Cow position: | chr7:15855524-15855308 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 39-259 |
| Cow position: | chr7:40726973-40727204 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 172 |
| Conread position: | 40-260 |
| Cow position: | chr7:48020218-48020432 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 41-247 |
| Cow position: | chr7:1558519-1558735 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 18, 152 |
| Conread position: | 43-266 |
| Cow position: | chr7:3311630-3311862 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 44-260 |
| Cow position: | chr7:35286838-35286626 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 44-265 |
| Cow position: | chr7:16022088-16022312 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 142 |
| Conread position: | 45-268 |
| Cow position: | chr7:57161936-57162174 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 49-259 |
| Cow position: | chr7:63946780-63946573 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 109, 79 |
| Conread position: | 50-254 |
| Cow position: | chr7:54479469-54479680 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 130 |
| Conread position: | 50-255 |
| Cow position: | chr7:39094119-39093921 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 128, 51 |
| Conread position: | 50-258 |
| Cow position: | chr7:42894246-42894454 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 50-265 |
| Cow position: | chr7:25263162-25263393 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 56-265 |
| Cow position: | chr7:7142265-7142044 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 206 |
| Conread position: | 57-258 |
| Cow position: | chr7:1761521-1761734 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 57-259 |
| Cow position: | chr7:256005-255803 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 57-259 |
| Cow position: | chr7:38696650-38696858 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 74, 109 |
| Conread position: | 57-274 |
| Cow position: | chr7:40121268-40121490 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 112 |
| Conread position: | 58-266 |
| Cow position: | chr7:67816711-67816920 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 6, 128 |
| Conread position: | 59-259 |
| Cow position: | chr7:54784005-54783809 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 143, 89 |
| Conread position: | 61-258 |
| Cow position: | chr7:32079265-32079459 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 123 |
| Conread position: | 62-255 |
| Cow position: | chr7:64135657-64135458 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 62-260 |
| Cow position: | chr7:13963010-13963215 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 64-252 |
| Cow position: | chr7:39144499-39144689 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 123 |
| Conread position: | 80-259 |
| Cow position: | chr7:32372684-32372870 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 98 |
| Conread position: | 91-237 |
| Cow position: | chr7:1375983-1376129 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 67, 83 |
| Conread position: | 135-260 |
| Cow position: | chr7:58923282-58923409 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 49 |
Show alignments to all cow chromosomes.