Cow genome map
Conread name: | rcbe26_b12.y1 |
Conread position: | 1-169 |
Cow position: | chr9:3532581-3532754 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 135 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 58, 120 |
Conread position: | 1-258 |
Cow position: | chr9:28726398-28726659 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 89 |
Conread position: | 1-259 |
Cow position: | chr9:1950250-1949980 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 206 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 44, 63 |
Conread position: | 1-260 |
Cow position: | chr9:1520401-1520678 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 80 |
Conread position: | 1-260 |
Cow position: | chr9:34000284-34000562 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 206 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 42, 26 |
Conread position: | 1-265 |
Cow position: | chr9:29184809-29185078 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 205 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 63, 26 |
Conread position: | 1-266 |
Cow position: | chr9:62442609-62442344 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 197 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 69, 88 |
Conread position: | 1-274 |
Cow position: | chr9:34287117-34286847 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 194 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 37, 15 |
Conread position: | 1-278 |
Cow position: | chr9:7410110-7409820 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 274 |
Conread position: | 4-238 |
Cow position: | chr9:49279776-49279556 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 179 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 154, 55 |
Conread position: | 4-253 |
Cow position: | chr9:7363360-7363091 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 196 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 4-259 |
Cow position: | chr9:54528840-54528572 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 204 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 55, 168 |
Conread position: | 4-260 |
Cow position: | chr9:26057127-26057382 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 192 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 154, 55 |
Conread position: | 7-244 |
Cow position: | chr9:13205248-13205490 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 189 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 26, 65 |
Conread position: | 7-247 |
Cow position: | chr9:1984198-1984453 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 192 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 21, 70 |
Conread position: | 7-253 |
Cow position: | chr9:29841211-29840951 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 194 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 7-253 |
Cow position: | chr9:41680055-41679812 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 193 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 38, 18 |
Conread position: | 7-254 |
Cow position: | chr9:5393372-5393114 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 201 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 51, 64 |
Conread position: | 7-254 |
Cow position: | chr9:48106795-48107050 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 190 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 7-255 |
Cow position: | chr9:5594822-5594566 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 188 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 52, 184 |
Conread position: | 7-255 |
Cow position: | chr9:43871294-43871043 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 113 |
Conread position: | 7-258 |
Cow position: | chr9:36445943-36445690 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 200 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 52, 64 |
Conread position: | 7-258 |
Cow position: | chr9:42498151-42497887 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 7-259 |
Cow position: | chr9:5246167-5245922 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 197 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 52, 18 |
Conread position: | 7-259 |
Cow position: | chr9:59172057-59172322 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 198 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 52, 15 |
Conread position: | 7-260 |
Cow position: | chr9:15215353-15215626 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 201 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 7-265 |
Cow position: | chr9:18162830-18163101 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 203 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 32, 82 |
Conread position: | 8-251 |
Cow position: | chr9:14974606-14974862 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 194 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 51, 14 |
Conread position: | 8-255 |
Cow position: | chr9:21888490-21888231 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 8-260 |
Cow position: | chr9:8998676-8998416 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 196 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 51, 183 |
Conread position: | 9-253 |
Cow position: | chr9:22114312-22114569 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 196 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 13, 184 |
Conread position: | 9-255 |
Cow position: | chr9:5501169-5500922 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 166 |
Conread position: | 9-273 |
Cow position: | chr9:52407490-52407213 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 10-253 |
Cow position: | chr9:50080727-50080980 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 194 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 49, 181 |
Conread position: | 13-255 |
Cow position: | chr9:7634584-7634338 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 180 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 46, 128 |
Conread position: | 13-255 |
Cow position: | chr9:9723567-9723818 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 184 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 46, 58 |
Conread position: | 16-255 |
Cow position: | chr9:20960970-20961212 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 181 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 30, 169 |
Conread position: | 23-259 |
Cow position: | chr9:10011108-10010862 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 186 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 26-254 |
Cow position: | chr9:45170866-45171101 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 173 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 33, 152 |
Conread position: | 29-259 |
Cow position: | chr9:54716326-54716546 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 164 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 32-258 |
Cow position: | chr9:35305820-35306056 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 178 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 10, 137 |
Conread position: | 32-259 |
Cow position: | chr9:55084000-55084237 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 182 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 27, 162 |
Conread position: | 33-255 |
Cow position: | chr9:58674037-58673804 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 174 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 26, 87 |
Conread position: | 34-266 |
Cow position: | chr9:55287600-55287838 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 184 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 63, 11 |
Conread position: | 38-221 |
Cow position: | chr9:34689321-34689503 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 141 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 21, 82 |
Conread position: | 41-247 |
Cow position: | chr9:11201867-11201665 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 15, 77 |
Conread position: | 47-252 |
Cow position: | chr9:41789556-41789352 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 158 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 91, 12 |
Conread position: | 50-253 |
Cow position: | chr9:9823243-9823439 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 151 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 17, 81 |
Conread position: | 50-255 |
Cow position: | chr9:8288894-8288682 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 158 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 21, 138 |
Conread position: | 50-265 |
Cow position: | chr9:5532228-5532002 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 168 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 91, 18 |
Conread position: | 58-252 |
Cow position: | chr9:33598249-33598048 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 159 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 85, 130 |
Conread position: | 58-259 |
Cow position: | chr9:9753128-9753332 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 163 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 100, 13 |
Conread position: | 61-254 |
Cow position: | chr9:23541153-23541342 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 154 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 99, 73 |
Conread position: | 61-255 |
Cow position: | chr9:55890076-55889875 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 8, 155 |
Conread position: | 61-255 |
Cow position: | chr9:64559622-64559820 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 153 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 87, 124 |
Conread position: | 61-259 |
Cow position: | chr9:6225187-6225393 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 162 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 79, 130 |
Conread position: | 64-251 |
Cow position: | chr9:38846087-38846275 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 136 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 82, 95 |
Conread position: | 68-253 |
Cow position: | chr9:38875316-38875509 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 147 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 71, 122 |
Conread position: | 89-258 |
Cow position: | chr9:40604187-40604006 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 137 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.