Cow genome map

Conread name: rcbl0_019776.y1

Conread position: 3-375
Cow position: chr10:45669660-45670043 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 154

Conread position: 3-409
Cow position: chr10:54799326-54798906 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-426
Cow position: chr10:4711205-4710778 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-436
Cow position: chr10:35308735-35308290 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 3-466
Cow position: chr10:2738071-2737595 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 313
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 61

Conread position: 3-473
Cow position: chr10:33665414-33664915 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 3-487
Cow position: chr10:6012453-6012953 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-491
Cow position: chr10:21422698-21423200 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-560
Cow position: chr10:66875511-66876062 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 163

Conread position: 3-568
Cow position: chr10:8460097-8459528 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 3-568
Cow position: chr10:43288499-43289073 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 150

Conread position: 3-572
Cow position: chr10:15867815-15867237 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 114

Conread position: 3-574
Cow position: chr10:3998485-3997922 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 120

Conread position: 3-580
Cow position: chr10:9798643-9799224 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 53

Conread position: 3-580
Cow position: chr10:15754239-15753652 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 121

Conread position: 3-580
Cow position: chr10:20372545-20373138 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 144

Conread position: 3-581
Cow position: chr10:48741595-48742179 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 139

Conread position: 3-582
Cow position: chr10:17868384-17868960 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 392
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 43, 98

Conread position: 3-582
Cow position: chr10:42636550-42635981 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-587
Cow position: chr10:3984997-3984397 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 3-588
Cow position: chr10:56834850-56834260 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 153

Conread position: 3-589
Cow position: chr10:130800-130203 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr10:1381373-1380779 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr10:1719969-1720584 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 3-589
Cow position: chr10:14331952-14332558 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 146

Conread position: 3-589
Cow position: chr10:20398777-20398197 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 35

Conread position: 3-589
Cow position: chr10:21449316-21449916 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 64

Conread position: 3-589
Cow position: chr10:22105366-22104763 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 144

Conread position: 3-589
Cow position: chr10:22321100-22320506 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 3-589
Cow position: chr10:23912957-23913571 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 351

Conread position: 3-589
Cow position: chr10:23935612-23935034 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 114

Conread position: 3-589
Cow position: chr10:25006141-25005549 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 71

Conread position: 3-589
Cow position: chr10:25259597-25259004 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 155

Conread position: 3-589
Cow position: chr10:29816160-29815568 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 314

Conread position: 3-589
Cow position: chr10:32704650-32704045 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr10:38013932-38013329 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 153

Conread position: 3-589
Cow position: chr10:38155031-38154432 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 80

Conread position: 3-589
Cow position: chr10:38942006-38941401 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 3-589
Cow position: chr10:40376875-40376290 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 3-589
Cow position: chr10:45648743-45648140 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr10:45769616-45769044 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 3-589
Cow position: chr10:46195370-46194756 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 3-589
Cow position: chr10:49146106-49145524 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 12

Conread position: 3-589
Cow position: chr10:51559288-51558683 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr10:53828470-53827864 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 4-507
Cow position: chr10:42459944-42460480 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 167

Conread position: 5-537
Cow position: chr10:44864715-44865255 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 55

Conread position: 9-409
Cow position: chr10:17836317-17836725 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 145

Conread position: 9-418
Cow position: chr10:30466360-30466773 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 272
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 83, 29

Conread position: 9-561
Cow position: chr10:43489513-43488939 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 140

Conread position: 9-577
Cow position: chr10:31182299-31182872 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr10:28236372-28235797 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 191

Conread position: 9-580
Cow position: chr10:31734555-31733975 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 77

Conread position: 9-580
Cow position: chr10:44765554-44764981 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 17

Conread position: 9-580
Cow position: chr10:64347836-64347263 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-581
Cow position: chr10:1979107-1979689 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 261

Conread position: 9-581
Cow position: chr10:22528335-22528928 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 147

Conread position: 9-581
Cow position: chr10:27094403-27095014 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 60

Conread position: 9-583
Cow position: chr10:50452433-50451846 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 9-584
Cow position: chr10:14905091-14904503 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 9-587
Cow position: chr10:47910497-47909900 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-588
Cow position: chr10:11111129-11110553 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 137

Conread position: 9-588
Cow position: chr10:20446670-20446096 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 131

Conread position: 9-589
Cow position: chr10:277477-278074 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:326972-326373 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:7894566-7895166 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:10148195-10147611 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 9-589
Cow position: chr10:12654085-12653486 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:15490709-15490110 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:15888855-15888265 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 9-589
Cow position: chr10:19843553-19842954 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:20871392-20870809 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:21656990-21656406 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 29

Conread position: 9-589
Cow position: chr10:23412927-23412329 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:24296595-24297220 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 7

Conread position: 9-589
Cow position: chr10:29777541-29776937 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chr10:32365822-32365222 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr10:37908266-37908867 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr10:41161279-41160687 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 112

Conread position: 9-589
Cow position: chr10:41570983-41570383 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr10:55096938-55096346 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:58937778-58938360 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 9-589
Cow position: chr10:60960499-60959894 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 141

Conread position: 9-589
Cow position: chr10:64304159-64304743 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 9-589
Cow position: chr10:65810287-65810886 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:66495520-66496119 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 326

Conread position: 10-563
Cow position: chr10:57142995-57143556 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 10-589
Cow position: chr10:1185293-1185879 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 112

Conread position: 11-523
Cow position: chr10:26145805-26146314 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 108

Conread position: 11-581
Cow position: chr10:36231549-36230993 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 135

Conread position: 11-589
Cow position: chr10:24624938-24625530 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 141

Conread position: 12-514
Cow position: chr10:40707393-40706885 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 339
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 102

Conread position: 12-584
Cow position: chr10:20516812-20516201 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 97

Conread position: 12-589
Cow position: chr10:76959-76381 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 12-589
Cow position: chr10:2612948-2612370 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 112

Conread position: 12-589
Cow position: chr10:26291608-26292206 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 14-517
Cow position: chr10:47590903-47591417 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 351
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 88

Conread position: 14-580
Cow position: chr10:21490802-21490230 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 14-581
Cow position: chr10:45484130-45484717 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 17-507
Cow position: chr10:26732090-26732603 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 18-580
Cow position: chr10:2516905-2516327 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 139

Conread position: 18-589
Cow position: chr10:14982102-14982678 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 99

Conread position: 19-454
Cow position: chr10:39939775-39940221 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 128

Conread position: 19-551
Cow position: chr10:63627001-63626464 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 128

Conread position: 22-589
Cow position: chr10:18885402-18885965 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 134

Conread position: 26-589
Cow position: chr10:29628404-29628985 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 131

Conread position: 27-410
Cow position: chr10:38519375-38519771 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 27-580
Cow position: chr10:16646443-16647017 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 72

Conread position: 27-589
Cow position: chr10:14948619-14948041 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 131

Conread position: 28-589
Cow position: chr10:19894859-19894293 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 29-449
Cow position: chr10:52288031-52288459 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 118

Conread position: 32-587
Cow position: chr10:14807795-14807222 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 115

Conread position: 33-589
Cow position: chr10:10721407-10721968 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 125

Conread position: 50-589
Cow position: chr10:37773719-37773162 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 96

Conread position: 55-580
Cow position: chr10:46226652-46226117 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 284

Conread position: 58-589
Cow position: chr10:30720527-30719978 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 88

Conread position: 58-589
Cow position: chr10:33555831-33556374 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 89

Conread position: 67-589
Cow position: chr10:59839959-59840492 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 68-472
Cow position: chr10:55027738-55027332 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 14

Conread position: 68-580
Cow position: chr10:42754858-42754352 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 86

Conread position: 68-589
Cow position: chr10:3506334-3506859 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 19

Conread position: 69-580
Cow position: chr10:8293948-8293423 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 39

Conread position: 69-589
Cow position: chr10:55975362-55974820 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 81

Conread position: 73-589
Cow position: chr10:40592031-40591498 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 7

Conread position: 84-589
Cow position: chr10:39080212-39079693 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 33

Conread position: 89-566
Cow position: chr10:6851014-6850528 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 67

Conread position: 90-440
Cow position: chr10:873987-873624 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 65

Conread position: 90-589
Cow position: chr10:28569247-28568718 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 53

Conread position: 98-589
Cow position: chr10:57553349-57553858 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 48

Conread position: 124-441
Cow position: chr10:29426715-29426390 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 31

Conread position: 135-587
Cow position: chr10:21081586-21081121 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 148

Conread position: 137-401
Cow position: chr10:55046706-55046433 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 136

Conread position: 146-586
Cow position: chr10:34666172-34666625 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 187

Conread position: 157-589
Cow position: chr10:51863635-51864056 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 175

Conread position: 167-580
Cow position: chr10:25181-24759 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 29

Conread position: 195-438
Cow position: chr10:30269426-30269664 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 168, 101

Conread position: 207-589
Cow position: chr10:42644208-42643832 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 57

Conread position: 209-532
Cow position: chr10:44259273-44259594 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 104, 6

Conread position: 210-386
Cow position: chr10:11216304-11216477 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 97, 114

Conread position: 211-418
Cow position: chr10:10753771-10753973 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 111

Conread position: 211-448
Cow position: chr10:9569197-9569434 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-511
Cow position: chr10:9527036-9527339 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 10

Conread position: 211-581
Cow position: chr10:9445608-9445991 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 6

Conread position: 211-586
Cow position: chr10:37530158-37530523 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 91

Conread position: 211-589
Cow position: chr10:2736682-2736297 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 90

Conread position: 211-589
Cow position: chr10:8682291-8681907 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 131

Conread position: 211-589
Cow position: chr10:11623062-11623445 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 118

Conread position: 211-589
Cow position: chr10:31816429-31816814 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 92

Conread position: 211-589
Cow position: chr10:41771836-41772211 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 69

Conread position: 211-589
Cow position: chr10:53058621-53059027 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 184

Conread position: 211-589
Cow position: chr10:63776495-63776111 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 118

Conread position: 212-579
Cow position: chr10:5784575-5784949 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 81

Conread position: 213-502
Cow position: chr10:54928275-54928561 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 48, 38

Conread position: 216-580
Cow position: chr10:19140960-19141316 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 35

Conread position: 216-589
Cow position: chr10:60206787-60206416 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 108

Conread position: 217-528
Cow position: chr10:41406327-41406006 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 153

Conread position: 217-589
Cow position: chr10:22978500-22978876 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 106

Conread position: 217-589
Cow position: chr10:28030279-28030651 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 217-589
Cow position: chr10:30681838-30682210 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 124

Conread position: 217-589
Cow position: chr10:50016731-50017089 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 93

Conread position: 218-589
Cow position: chr10:27120254-27120628 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 113

Conread position: 218-589
Cow position: chr10:32087321-32086965 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 89, 22

Conread position: 222-580
Cow position: chr10:60354795-60354431 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 224-584
Cow position: chr10:24935901-24936263 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 230
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 232, 97

Conread position: 227-580
Cow position: chr10:55098305-55098651 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 37

Conread position: 227-589
Cow position: chr10:50199614-50199265 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 231-589
Cow position: chr10:21709594-21709953 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 73, 13

Conread position: 232-589
Cow position: chr10:37788358-37788722 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 108

Conread position: 233-589
Cow position: chr10:39638345-39637984 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 96

Conread position: 240-437
Cow position: chr10:69531254-69531062 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 87

Conread position: 255-582
Cow position: chr10:41623191-41622867 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 38

Conread position: 259-589
Cow position: chr10:48909554-48909218 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 110, 81

Conread position: 261-589
Cow position: chr10:68095453-68095786 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 52

Conread position: 262-581
Cow position: chr10:9452044-9452363 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 78

Conread position: 266-581
Cow position: chr10:24751521-24751205 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 41, 64

Conread position: 266-589
Cow position: chr10:55931094-55930765 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 57

Conread position: 272-473
Cow position: chr10:63046196-63045990 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 68

Conread position: 272-589
Cow position: chr10:55037014-55036699 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 30

Conread position: 273-589
Cow position: chr10:11406874-11406562 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 282-589
Cow position: chr10:17222968-17222655 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 47

Conread position: 285-589
Cow position: chr10:26766139-26765830 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 44

Conread position: 303-589
Cow position: chr10:60723411-60723696 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 306-565
Cow position: chr10:10101374-10101112 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 85

Conread position: 313-488
Cow position: chr10:23097876-23098056 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 65

Conread position: 329-588
Cow position: chr10:31005766-31006030 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 240

Conread position: 330-581
Cow position: chr10:25866145-25866402 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 330-583
Cow position: chr10:38542172-38542430 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 172

Conread position: 330-587
Cow position: chr10:9580526-9580789 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 49

Conread position: 336-589
Cow position: chr10:1662430-1662690 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 200

Conread position: 340-509
Cow position: chr10:52828827-52829001 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 340-589
Cow position: chr10:30689538-30689281 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 113, 195

Conread position: 342-581
Cow position: chr10:8220040-8219801 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 153

Conread position: 347-588
Cow position: chr10:31465824-31465566 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 217

Conread position: 349-589
Cow position: chr10:59173540-59173786 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 350-589
Cow position: chr10:10047014-10047257 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 118

Conread position: 351-589
Cow position: chr10:60029249-60029005 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 152

Conread position: 357-589
Cow position: chr10:41917422-41917657 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 47

Conread position: 359-589
Cow position: chr10:49914239-49914476 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 364-589
Cow position: chr10:5858336-5858105 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 90, 171

Conread position: 367-589
Cow position: chr10:20380477-20380705 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 392-568
Cow position: chr10:11216708-11216890 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 144

Conread position: 400-589
Cow position: chr10:24757598-24757405 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 155

Conread position: 401-589
Cow position: chr10:16929640-16929446 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 134

Conread position: 401-589
Cow position: chr10:22984253-22984441 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 100

Conread position: 438-589
Cow position: chr10:19491340-19491494 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 111

Conread position: 444-584
Cow position: chr10:69530882-69530745 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 447-589
Cow position: chr10:38818333-38818190 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 83

Conread position: 449-589
Cow position: chr10:46241460-46241318 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 454-589
Cow position: chr10:42213878-42213744 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 128, 108

Show alignments to all cow chromosomes.