Cow genome map

Conread name: rcbl0_019776.y1

Conread position: 3-369
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 40

Conread position: 3-469
Cow position:
Alignm length: 490
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 3-488
Cow position:
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-545
Cow position:
Alignm length: 564
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 24

Conread position: 3-570
Cow position:
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 34

Conread position: 3-577
Cow position:
Alignm length: 594
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 148

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-580
Cow position:
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 3-580
Cow position:
Alignm length: 592
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 148

Conread position: 3-580
Cow position:
Alignm length: 595
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 53

Conread position: 3-583
Cow position:
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-586
Cow position:
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 183

Conread position: 3-589
Cow position:
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position:
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 3-589
Cow position:
Alignm length: 611
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 153

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 78

Conread position: 3-589
Cow position:
Alignm length: 617
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 271

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-589
Cow position:
Alignm length: 611
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 154

Conread position: 3-589
Cow position:
Alignm length: 597
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 32

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position:
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 156

Conread position: 3-589
Cow position:
Alignm length: 607
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position:
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 5-542
Cow position:
Alignm length: 562
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 83

Conread position: 5-589
Cow position:
Alignm length: 611
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 147

Conread position: 9-429
Cow position:
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 105

Conread position: 9-493
Cow position:
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 9-493
Cow position:
Alignm length: 512
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 104

Conread position: 9-517
Cow position:
Alignm length: 522
Alignm identity: 329
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 29

Conread position: 9-536
Cow position:
Alignm length: 543
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 240

Conread position: 9-583
Cow position:
Alignm length: 600
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-587
Cow position:
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 147

Conread position: 9-588
Cow position:
Alignm length: 601
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 9-589
Cow position:
Alignm length: 604
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 263

Conread position: 9-589
Cow position:
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 138

Conread position: 9-589
Cow position:
Alignm length: 595
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 102

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 605
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 599
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 98

Conread position: 9-589
Cow position:
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 605
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-589
Cow position:
Alignm length: 605
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 146

Conread position: 12-583
Cow position:
Alignm length: 590
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 138

Conread position: 12-587
Cow position:
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 12-587
Cow position:
Alignm length: 599
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 13-584
Cow position:
Alignm length: 601
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 120

Conread position: 13-589
Cow position:
Alignm length: 604
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 15-487
Cow position:
Alignm length: 509
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 131

Conread position: 17-589
Cow position:
Alignm length: 586
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 18-580
Cow position:
Alignm length: 594
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 99

Conread position: 27-589
Cow position:
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-589
Cow position:
Alignm length: 604
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 38-587
Cow position:
Alignm length: 575
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 117

Conread position: 39-449
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 240

Conread position: 57-589
Cow position:
Alignm length: 559
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 89

Conread position: 69-589
Cow position:
Alignm length: 544
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 52

Conread position: 80-427
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 129, 66

Conread position: 80-569
Cow position:
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 196

Conread position: 207-580
Cow position:
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 307

Conread position: 211-414
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 96, 114

Conread position: 211-421
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 96, 129

Conread position: 211-426
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 158, 63

Conread position: 211-523
Cow position:
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 91

Conread position: 211-581
Cow position:
Alignm length: 379
Alignm identity: 239
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 117

Conread position: 211-584
Cow position:
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 117

Conread position: 211-587
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 73

Conread position: 211-589
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 60

Conread position: 211-589
Cow position:
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 19

Conread position: 211-589
Cow position:
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 95

Conread position: 211-589
Cow position:
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 216-580
Cow position:
Alignm length: 371
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 45

Conread position: 217-569
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 85

Conread position: 217-580
Cow position:
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 52

Conread position: 217-581
Cow position:
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 67

Conread position: 217-584
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 227-589
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 143, 61

Conread position: 231-580
Cow position:
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 13

Conread position: 232-589
Cow position:
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 98

Conread position: 233-525
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 248-589
Cow position:
Alignm length: 357
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 79

Conread position: 255-570
Cow position:
Alignm length: 329
Alignm identity: 230
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 52, 83

Conread position: 261-589
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 255

Conread position: 262-589
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 61

Conread position: 262-589
Cow position:
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 190

Conread position: 263-589
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 67

Conread position: 266-589
Cow position:
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 37

Conread position: 272-576
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 30

Conread position: 281-456
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 102

Conread position: 298-441
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 9, 42

Conread position: 307-589
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 65, 23

Conread position: 330-589
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 60

Conread position: 331-589
Cow position:
Alignm length: 266
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 237

Conread position: 339-589
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 340-584
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 347-589
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 21

Conread position: 349-580
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 34

Conread position: 349-580
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 34

Conread position: 349-589
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 350-580
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 112

Conread position: 358-589
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 5

Conread position: 370-584
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 378-589
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 381-589
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 120

Conread position: 392-580
Cow position:
Alignm length: 189
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 396-589
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 9

Conread position: 396-589
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 139

Conread position: 403-589
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 132

Conread position: 413-589
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 127

Conread position: 425-589
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 110

Conread position: 442-589
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 88

Conread position: 447-585
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 447-587
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 46

Show alignments to all cow chromosomes.