Cow genome map

Conread name: rcbl0_019776.y1

Conread position: 3-375
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 27, 147

Conread position: 3-452
Cow position:
Alignm length: 467
Alignm identity: 313
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 123, 12

Conread position: 3-456
Cow position:
Alignm length: 463
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 3-485
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 182

Conread position: 3-512
Cow position:
Alignm length: 533
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-512
Cow position:
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 34

Conread position: 3-520
Cow position:
Alignm length: 535
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 104

Conread position: 3-555
Cow position:
Alignm length: 578
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 40

Conread position: 3-568
Cow position:
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 3-580
Cow position:
Alignm length: 601
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 3-580
Cow position:
Alignm length: 596
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 34

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-581
Cow position:
Alignm length: 595
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 71

Conread position: 3-581
Cow position:
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-587
Cow position:
Alignm length: 603
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 83

Conread position: 3-588
Cow position:
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 340

Conread position: 3-589
Cow position:
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-589
Cow position:
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position:
Alignm length: 609
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 3-589
Cow position:
Alignm length: 614
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position:
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position:
Alignm length: 611
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position:
Alignm length: 614
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 3-589
Cow position:
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 5-420
Cow position:
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 144

Conread position: 6-587
Cow position:
Alignm length: 606
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 9-365
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 7

Conread position: 9-395
Cow position:
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 131

Conread position: 9-478
Cow position:
Alignm length: 491
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 125

Conread position: 9-536
Cow position:
Alignm length: 554
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 147

Conread position: 9-572
Cow position:
Alignm length: 586
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 104

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position:
Alignm length: 588
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 151

Conread position: 9-582
Cow position:
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 109

Conread position: 9-589
Cow position:
Alignm length: 601
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position:
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 608
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 9-589
Cow position:
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position:
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 154

Conread position: 9-589
Cow position:
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position:
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 9-589
Cow position:
Alignm length: 602
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 124

Conread position: 9-589
Cow position:
Alignm length: 596
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 116

Conread position: 9-589
Cow position:
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 125

Conread position: 9-589
Cow position:
Alignm length: 605
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-589
Cow position:
Alignm length: 599
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 9-589
Cow position:
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 599
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 68

Conread position: 9-589
Cow position:
Alignm length: 602
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 165

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 138

Conread position: 9-589
Cow position:
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-589
Cow position:
Alignm length: 590
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-540
Cow position:
Alignm length: 552
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 51

Conread position: 11-537
Cow position:
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 106

Conread position: 12-411
Cow position:
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 12-509
Cow position:
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 201

Conread position: 12-580
Cow position:
Alignm length: 591
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 17

Conread position: 13-580
Cow position:
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 14-568
Cow position:
Alignm length: 566
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 133

Conread position: 15-589
Cow position:
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 28

Conread position: 16-580
Cow position:
Alignm length: 595
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 18-589
Cow position:
Alignm length: 595
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 56

Conread position: 27-566
Cow position:
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 129

Conread position: 27-576
Cow position:
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 67

Conread position: 29-494
Cow position:
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 35-441
Cow position:
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 26

Conread position: 38-502
Cow position:
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 107

Conread position: 38-581
Cow position:
Alignm length: 568
Alignm identity: 366
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 161, 36

Conread position: 38-587
Cow position:
Alignm length: 574
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 109

Conread position: 38-588
Cow position:
Alignm length: 579
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 111

Conread position: 44-580
Cow position:
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 102

Conread position: 45-416
Cow position:
Alignm length: 386
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 89

Conread position: 45-589
Cow position:
Alignm length: 571
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 110

Conread position: 50-589
Cow position:
Alignm length: 565
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 96

Conread position: 56-487
Cow position:
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 96

Conread position: 56-589
Cow position:
Alignm length: 555
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 90

Conread position: 57-468
Cow position:
Alignm length: 432
Alignm identity: 293
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 145, 89

Conread position: 67-580
Cow position:
Alignm length: 537
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 69-580
Cow position:
Alignm length: 529
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 76

Conread position: 69-589
Cow position:
Alignm length: 550
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 78

Conread position: 117-589
Cow position:
Alignm length: 503
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 117-589
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 29

Conread position: 149-589
Cow position:
Alignm length: 466
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 202

Conread position: 207-580
Cow position:
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 82

Conread position: 210-589
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 88

Conread position: 211-493
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 93, 29

Conread position: 211-512
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 117

Conread position: 211-579
Cow position:
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 99

Conread position: 211-581
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 251

Conread position: 211-584
Cow position:
Alignm length: 381
Alignm identity: 259
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 92

Conread position: 211-589
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 213-401
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 86, 123

Conread position: 213-589
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 58

Conread position: 216-589
Cow position:
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 124

Conread position: 217-580
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 217-589
Cow position:
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 112

Conread position: 217-589
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 63

Conread position: 218-589
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 120

Conread position: 218-589
Cow position:
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 105

Conread position: 218-589
Cow position:
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 105

Conread position: 222-589
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 80

Conread position: 230-589
Cow position:
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 235-589
Cow position:
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 24

Conread position: 235-589
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 135, 66

Conread position: 237-589
Cow position:
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 65

Conread position: 240-589
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 83

Conread position: 257-589
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 50, 66

Conread position: 263-455
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 76

Conread position: 265-512
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 132

Conread position: 267-470
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 35

Conread position: 267-584
Cow position:
Alignm length: 336
Alignm identity: 238
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 19, 151

Conread position: 272-533
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 55

Conread position: 284-572
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 56

Conread position: 286-589
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 21, 37

Conread position: 330-447
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 330-503
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 50

Conread position: 330-581
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 72

Conread position: 330-589
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 12, 224

Conread position: 333-583
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 149

Conread position: 337-588
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 199

Conread position: 347-587
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 174

Conread position: 347-589
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 115

Conread position: 364-581
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 156

Conread position: 365-589
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 89, 170

Conread position: 367-589
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 87, 168

Conread position: 373-589
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 20

Conread position: 447-589
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 83

Show alignments to all cow chromosomes.