Cow genome map

Conread name: rcbl0_019776.y1

Conread position: 3-407
Cow position:
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 100

Conread position: 3-456
Cow position:
Alignm length: 478
Alignm identity: 294
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 150, 277

Conread position: 3-482
Cow position:
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 79

Conread position: 3-491
Cow position:
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 3-553
Cow position:
Alignm length: 589
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 3-574
Cow position:
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 61

Conread position: 3-580
Cow position:
Alignm length: 598
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 3-581
Cow position:
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 148

Conread position: 3-581
Cow position:
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 40

Conread position: 3-581
Cow position:
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 153

Conread position: 3-582
Cow position:
Alignm length: 605
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 145

Conread position: 3-583
Cow position:
Alignm length: 619
Alignm identity: 401
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 45, 18

Conread position: 3-589
Cow position:
Alignm length: 607
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 3-589
Cow position:
Alignm length: 613
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 153

Conread position: 3-589
Cow position:
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-589
Cow position:
Alignm length: 613
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 112

Conread position: 3-589
Cow position:
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position:
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position:
Alignm length: 609
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 21

Conread position: 3-589
Cow position:
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 122

Conread position: 4-437
Cow position:
Alignm length: 450
Alignm identity: 301
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 93

Conread position: 4-576
Cow position:
Alignm length: 607
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 4-582
Cow position:
Alignm length: 594
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 4-589
Cow position:
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 143

Conread position: 4-589
Cow position:
Alignm length: 597
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 143

Conread position: 6-589
Cow position:
Alignm length: 599
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 37

Conread position: 9-416
Cow position:
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 9-452
Cow position:
Alignm length: 459
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 306

Conread position: 9-542
Cow position:
Alignm length: 554
Alignm identity: 353
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 41, 345

Conread position: 9-568
Cow position:
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 116

Conread position: 9-580
Cow position:
Alignm length: 594
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 114

Conread position: 9-580
Cow position:
Alignm length: 598
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 66

Conread position: 9-580
Cow position:
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 9-581
Cow position:
Alignm length: 593
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 175

Conread position: 9-581
Cow position:
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 128

Conread position: 9-589
Cow position:
Alignm length: 602
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 327

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 72

Conread position: 9-589
Cow position:
Alignm length: 601
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position:
Alignm length: 606
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 608
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position:
Alignm length: 600
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 585
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 116

Conread position: 9-589
Cow position:
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position:
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 11-589
Cow position:
Alignm length: 603
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 64

Conread position: 12-589
Cow position:
Alignm length: 618
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 77

Conread position: 13-588
Cow position:
Alignm length: 604
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-589
Cow position:
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-589
Cow position:
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 138

Conread position: 14-589
Cow position:
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 133

Conread position: 26-589
Cow position:
Alignm length: 590
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 121

Conread position: 27-563
Cow position:
Alignm length: 548
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-587
Cow position:
Alignm length: 582
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 129

Conread position: 27-589
Cow position:
Alignm length: 590
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 94

Conread position: 28-580
Cow position:
Alignm length: 577
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 107

Conread position: 33-581
Cow position:
Alignm length: 572
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 50-589
Cow position:
Alignm length: 549
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 90

Conread position: 58-428
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 69

Conread position: 62-589
Cow position:
Alignm length: 553
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 84

Conread position: 69-589
Cow position:
Alignm length: 537
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 32

Conread position: 87-448
Cow position:
Alignm length: 389
Alignm identity: 271
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 122, 59

Conread position: 87-588
Cow position:
Alignm length: 536
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 68

Conread position: 116-589
Cow position:
Alignm length: 493
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 228

Conread position: 165-583
Cow position:
Alignm length: 425
Alignm identity: 281
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 52

Conread position: 192-409
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 19

Conread position: 211-493
Cow position:
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-575
Cow position:
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 61

Conread position: 211-580
Cow position:
Alignm length: 379
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 80

Conread position: 211-580
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-589
Cow position:
Alignm length: 383
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 113

Conread position: 211-589
Cow position:
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 105

Conread position: 217-583
Cow position:
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 63

Conread position: 221-491
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 87, 22

Conread position: 222-580
Cow position:
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 18

Conread position: 232-472
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 52

Conread position: 234-540
Cow position:
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 62

Conread position: 234-589
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 18

Conread position: 254-589
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 41

Conread position: 257-589
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 72

Conread position: 258-583
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 73

Conread position: 283-581
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 48

Conread position: 291-581
Cow position:
Alignm length: 300
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 213

Conread position: 299-521
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 17

Conread position: 307-589
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 32

Conread position: 329-589
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 112

Conread position: 330-536
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 18

Conread position: 330-588
Cow position:
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 49

Conread position: 330-589
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 332-584
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 177

Conread position: 336-589
Cow position:
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 158

Conread position: 337-589
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 125

Conread position: 340-532
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 14

Conread position: 340-589
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 196

Conread position: 341-589
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 345-581
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 26

Conread position: 361-589
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 18

Conread position: 381-587
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 80, 0

Conread position: 390-589
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 176

Conread position: 392-581
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 62, 143

Conread position: 400-568
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 49

Show alignments to all cow chromosomes.