Cow genome map
Conread name: | rcbl0_019776.y1 |
Conread position: | 3-568 |
Cow position: | chr18:28929535-28930105 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 162 |
Conread position: | 3-574 |
Cow position: | chr18:54033605-54033029 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 144 |
Conread position: | 3-580 |
Cow position: | chr18:33851448-33850845 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 152 |
Conread position: | 3-589 |
Cow position: | chr18:5536881-5536277 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 145 |
Conread position: | 3-589 |
Cow position: | chr18:16094786-16094190 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 24 |
Conread position: | 3-589 |
Cow position: | chr18:17324283-17323685 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 138 |
Conread position: | 3-589 |
Cow position: | chr18:17334837-17335435 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 62 |
Conread position: | 3-589 |
Cow position: | chr18:22790504-22791118 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 153 |
Conread position: | 3-589 |
Cow position: | chr18:23658996-23659589 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 117 |
Conread position: | 3-589 |
Cow position: | chr18:23802930-23802328 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 144 |
Conread position: | 3-589 |
Cow position: | chr18:27990667-27990062 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 144 |
Conread position: | 3-589 |
Cow position: | chr18:33407201-33406613 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 153 |
Conread position: | 3-589 |
Cow position: | chr18:36512537-36511939 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 144 |
Conread position: | 3-589 |
Cow position: | chr18:36649285-36648710 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 169 |
Conread position: | 3-589 |
Cow position: | chr18:36770629-36771227 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 149 |
Conread position: | 5-589 |
Cow position: | chr18:11779228-11778644 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 61 |
Conread position: | 9-512 |
Cow position: | chr18:26306169-26305656 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-577 |
Cow position: | chr18:36121954-36122544 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 7 |
Conread position: | 9-580 |
Cow position: | chr18:3190648-3190059 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-580 |
Cow position: | chr18:27540326-27539747 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 138 |
Conread position: | 9-580 |
Cow position: | chr18:40196015-40195427 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-580 |
Cow position: | chr18:45979261-45978697 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 72 |
Conread position: | 9-581 |
Cow position: | chr18:90027-89460 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 258, 137 |
Conread position: | 9-581 |
Cow position: | chr18:42080116-42080705 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 144 |
Conread position: | 9-587 |
Cow position: | chr18:43463867-43464465 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 115 |
Conread position: | 9-588 |
Cow position: | chr18:17944421-17943818 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 351 |
Conread position: | 9-589 |
Cow position: | chr18:13270806-13270215 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-589 |
Cow position: | chr18:19356427-19355818 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 154 |
Conread position: | 9-589 |
Cow position: | chr18:19462184-19461585 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-589 |
Cow position: | chr18:29072320-29071726 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 136 |
Conread position: | 9-589 |
Cow position: | chr18:29079641-29079042 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 137 |
Conread position: | 9-589 |
Cow position: | chr18:30844003-30844599 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 64 |
Conread position: | 9-589 |
Cow position: | chr18:30876374-30876960 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 60 |
Conread position: | 9-589 |
Cow position: | chr18:31139653-31139057 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-589 |
Cow position: | chr18:33272503-33271942 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 34 |
Conread position: | 9-589 |
Cow position: | chr18:37733595-37732994 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 143 |
Conread position: | 9-589 |
Cow position: | chr18:40484900-40484305 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 137 |
Conread position: | 9-589 |
Cow position: | chr18:41238429-41237843 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 122 |
Conread position: | 9-589 |
Cow position: | chr18:43473490-43472903 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-589 |
Cow position: | chr18:47745643-47745058 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 43 |
Conread position: | 9-589 |
Cow position: | chr18:50092544-50093139 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 10-503 |
Cow position: | chr18:51578604-51579117 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 337 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 38, 65 |
Conread position: | 11-429 |
Cow position: | chr18:28530552-28530983 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 290 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 40, 146 |
Conread position: | 12-449 |
Cow position: | chr18:27799978-27800430 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 84 |
Conread position: | 12-580 |
Cow position: | chr18:33608133-33607550 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 130 |
Conread position: | 12-589 |
Cow position: | chr18:42242439-42243038 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 144 |
Conread position: | 13-589 |
Cow position: | chr18:12270052-12269458 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 21 |
Conread position: | 13-589 |
Cow position: | chr18:14419877-14419282 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 11 |
Conread position: | 13-589 |
Cow position: | chr18:29797184-29797780 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 111 |
Conread position: | 15-542 |
Cow position: | chr18:39002250-39002771 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 30 |
Conread position: | 18-532 |
Cow position: | chr18:12249578-12249047 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 332 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 29, 58 |
Conread position: | 26-589 |
Cow position: | chr18:30607583-30607001 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 121 |
Conread position: | 29-589 |
Cow position: | chr18:16471335-16471873 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 95 |
Conread position: | 30-587 |
Cow position: | chr18:26335278-26335850 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 125 |
Conread position: | 33-431 |
Cow position: | chr18:51679346-51679739 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 115 |
Conread position: | 33-575 |
Cow position: | chr18:20151475-20150929 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 150 |
Conread position: | 38-564 |
Cow position: | chr18:39494643-39494120 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 124 |
Conread position: | 53-581 |
Cow position: | chr18:6103561-6104087 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 93 |
Conread position: | 88-580 |
Cow position: | chr18:19310972-19310482 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 58 |
Conread position: | 91-569 |
Cow position: | chr18:52698443-52697957 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 320 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 118, 55 |
Conread position: | 99-456 |
Cow position: | chr18:6425210-6425542 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 253 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 271, 14 |
Conread position: | 149-581 |
Cow position: | chr18:47985633-47985206 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 308 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 14, 129 |
Conread position: | 207-502 |
Cow position: | chr18:36477478-36477174 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 74 |
Conread position: | 207-589 |
Cow position: | chr18:37692591-37692982 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 136 |
Conread position: | 211-406 |
Cow position: | chr18:28767562-28767371 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 140 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 46, 119 |
Conread position: | 211-459 |
Cow position: | chr18:15324378-15324628 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 176 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 96, 127 |
Conread position: | 211-509 |
Cow position: | chr18:15911806-15911504 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 118 |
Conread position: | 211-568 |
Cow position: | chr18:1022339-1022695 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 104 |
Conread position: | 211-581 |
Cow position: | chr18:15172520-15172165 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 267 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 112, 25 |
Conread position: | 212-589 |
Cow position: | chr18:44261744-44261373 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 44 |
Conread position: | 215-542 |
Cow position: | chr18:31996618-31996287 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 107 |
Conread position: | 217-578 |
Cow position: | chr18:35296818-35296468 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 246 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 153, 15 |
Conread position: | 217-589 |
Cow position: | chr18:36457949-36457563 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 263 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 90, 133 |
Conread position: | 218-576 |
Cow position: | chr18:46869823-46869475 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 99 |
Conread position: | 218-589 |
Cow position: | chr18:11870169-11869792 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 111 |
Conread position: | 218-589 |
Cow position: | chr18:54463187-54462838 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 253 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 81, 37 |
Conread position: | 231-589 |
Cow position: | chr18:23688841-23688477 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 98 |
Conread position: | 232-589 |
Cow position: | chr18:53872546-53872198 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 70 |
Conread position: | 251-589 |
Cow position: | chr18:16025005-16025353 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 288 |
Conread position: | 259-476 |
Cow position: | chr18:31563835-31564052 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 167 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 110, 68 |
Conread position: | 306-583 |
Cow position: | chr18:7930998-7931267 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 197 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 63, 24 |
Conread position: | 311-589 |
Cow position: | chr18:28084635-28084352 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 205 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 59, 11 |
Conread position: | 313-588 |
Cow position: | chr18:36776867-36776583 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 201 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 11, 226 |
Conread position: | 321-542 |
Cow position: | chr18:37492372-37492145 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 160 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 330-580 |
Cow position: | chr18:6866799-6866542 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 180 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 12, 207 |
Conread position: | 330-589 |
Cow position: | chr18:32164359-32164626 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 197 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 336-532 |
Cow position: | chr18:51610548-51610344 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 150 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 349-568 |
Cow position: | chr18:48240883-48240676 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 46, 20 |
Conread position: | 355-589 |
Cow position: | chr18:10890294-10890063 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 163 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 15, 59 |
Conread position: | 375-588 |
Cow position: | chr18:6466010-6466226 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 149 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 67, 175 |
Conread position: | 447-589 |
Cow position: | chr18:36233639-36233783 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 106 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.