Cow genome map
Conread name: | rcbl0_019776.y1 |
Conread position: | 3-376 |
Cow position: | chr19:12613943-12614320 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 267 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 204, 46 |
Conread position: | 3-431 |
Cow position: | chr19:2821156-2820731 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 115 |
Conread position: | 3-438 |
Cow position: | chr19:32457227-32456781 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 145 |
Conread position: | 3-441 |
Cow position: | chr19:29071139-29071574 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 144 |
Conread position: | 3-491 |
Cow position: | chr19:14581189-14580690 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 35 |
Conread position: | 3-501 |
Cow position: | chr19:15766692-15766168 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 157 |
Conread position: | 3-508 |
Cow position: | chr19:42274310-42274828 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 154 |
Conread position: | 3-580 |
Cow position: | chr19:5733407-5732816 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 144 |
Conread position: | 3-581 |
Cow position: | chr19:27612596-27613183 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 199 |
Conread position: | 3-584 |
Cow position: | chr19:12652791-12652192 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 144 |
Conread position: | 3-588 |
Cow position: | chr19:6556528-6555933 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 152 |
Conread position: | 3-588 |
Cow position: | chr19:7491997-7491407 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 145 |
Conread position: | 3-589 |
Cow position: | chr19:930735-930130 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 153 |
Conread position: | 3-589 |
Cow position: | chr19:2260538-2261134 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 84 |
Conread position: | 3-589 |
Cow position: | chr19:2589100-2588500 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 153 |
Conread position: | 3-589 |
Cow position: | chr19:15719998-15720562 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 152 |
Conread position: | 3-589 |
Cow position: | chr19:25086110-25085519 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 153 |
Conread position: | 3-589 |
Cow position: | chr19:36352185-36351580 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 145 |
Conread position: | 3-589 |
Cow position: | chr19:48534636-48534041 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 310 |
Conread position: | 5-587 |
Cow position: | chr19:7472964-7472373 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 120 |
Conread position: | 9-477 |
Cow position: | chr19:1169013-1169496 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 137 |
Conread position: | 9-507 |
Cow position: | chr19:19500783-19501297 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 137 |
Conread position: | 9-507 |
Cow position: | chr19:20433333-20433844 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-553 |
Cow position: | chr19:14180091-14180652 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-557 |
Cow position: | chr19:30237615-30237054 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 139 |
Conread position: | 9-580 |
Cow position: | chr19:208406-207821 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 139 |
Conread position: | 9-581 |
Cow position: | chr19:35982663-35982091 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 148 |
Conread position: | 9-589 |
Cow position: | chr19:42246-41644 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 329 |
Conread position: | 9-589 |
Cow position: | chr19:777426-776824 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-589 |
Cow position: | chr19:9704282-9704875 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 147 |
Conread position: | 9-589 |
Cow position: | chr19:23488664-23488070 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 39 |
Conread position: | 9-589 |
Cow position: | chr19:29367438-29366839 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 138 |
Conread position: | 9-589 |
Cow position: | chr19:29624945-29624347 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 9-589 |
Cow position: | chr19:55163747-55164346 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 141 |
Conread position: | 10-507 |
Cow position: | chr19:12375472-12375976 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 16 |
Conread position: | 10-589 |
Cow position: | chr19:34985984-34985400 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 47 |
Conread position: | 12-566 |
Cow position: | chr19:26518429-26518996 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 135 |
Conread position: | 12-580 |
Cow position: | chr19:255218-255804 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 139 |
Conread position: | 16-365 |
Cow position: | chr19:44754005-44754357 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 227 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 21, 48 |
Conread position: | 27-589 |
Cow position: | chr19:33877308-33876727 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 120 |
Conread position: | 29-481 |
Cow position: | chr19:3032449-3032918 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 47 |
Conread position: | 38-580 |
Cow position: | chr19:176356-175789 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 108 |
Conread position: | 50-589 |
Cow position: | chr19:3086657-3086104 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 96 |
Conread position: | 58-589 |
Cow position: | chr19:33945426-33944878 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 91 |
Conread position: | 58-589 |
Cow position: | chr19:44839339-44839858 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 34 |
Conread position: | 59-417 |
Cow position: | chr19:31762279-31762659 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 263 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 117, 87 |
Conread position: | 72-480 |
Cow position: | chr19:1267381-1267807 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 74 |
Conread position: | 118-589 |
Cow position: | chr19:35843644-35843165 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 27 |
Conread position: | 152-427 |
Cow position: | chr19:9542934-9543227 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 209 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 53, 197 |
Conread position: | 153-589 |
Cow position: | chr19:17883703-17883276 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 308 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 45, 132 |
Conread position: | 154-581 |
Cow position: | chr19:19173427-19172973 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 126 |
Conread position: | 188-517 |
Cow position: | chr19:3084964-3085285 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 231 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 21, 35 |
Conread position: | 204-472 |
Cow position: | chr19:4360211-4359928 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 195 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 14, 140 |
Conread position: | 211-379 |
Cow position: | chr19:33616757-33616586 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 211-512 |
Cow position: | chr19:44216155-44216460 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 218 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 91, 127 |
Conread position: | 211-518 |
Cow position: | chr19:39077128-39076829 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 219 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 96, 75 |
Conread position: | 211-581 |
Cow position: | chr19:20671908-20672275 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 63 |
Conread position: | 211-584 |
Cow position: | chr19:39697169-39696801 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 60 |
Conread position: | 211-589 |
Cow position: | chr19:5902723-5902338 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 114 |
Conread position: | 211-589 |
Cow position: | chr19:7078951-7078567 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 112 |
Conread position: | 211-589 |
Cow position: | chr19:20612029-20611645 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 112 |
Conread position: | 211-589 |
Cow position: | chr19:32140692-32140308 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 44 |
Conread position: | 211-589 |
Cow position: | chr19:32952514-32952132 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 89 |
Conread position: | 211-589 |
Cow position: | chr19:35781572-35781187 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 127 |
Conread position: | 211-589 |
Cow position: | chr19:46821542-46821165 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 21 |
Conread position: | 215-580 |
Cow position: | chr19:743031-743386 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 38 |
Conread position: | 217-589 |
Cow position: | chr19:2269615-2269990 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 54 |
Conread position: | 218-589 |
Cow position: | chr19:31782258-31781882 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 111 |
Conread position: | 221-580 |
Cow position: | chr19:6784-6425 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 34 |
Conread position: | 237-589 |
Cow position: | chr19:33528516-33528158 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 86 |
Conread position: | 241-583 |
Cow position: | chr19:14528495-14528149 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 202 |
Conread position: | 244-589 |
Cow position: | chr19:2019103-2019452 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 173 |
Conread position: | 245-512 |
Cow position: | chr19:39726457-39726191 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 188 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 125, 57 |
Conread position: | 246-589 |
Cow position: | chr19:39394861-39394512 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 85 |
Conread position: | 257-580 |
Cow position: | chr19:405797-405469 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 233 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 51, 67 |
Conread position: | 262-589 |
Cow position: | chr19:3221747-3221423 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 35 |
Conread position: | 265-440 |
Cow position: | chr19:42297856-42298032 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 126 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 50, 73 |
Conread position: | 306-467 |
Cow position: | chr19:42725612-42725451 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 63, 142 |
Conread position: | 329-589 |
Cow position: | chr19:42867042-42866776 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 8 |
Conread position: | 330-491 |
Cow position: | chr19:38811932-38811767 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 131 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 7, 120 |
Conread position: | 330-580 |
Cow position: | chr19:1293927-1293671 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 182 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 39, 205 |
Conread position: | 330-582 |
Cow position: | chr19:45464710-45464453 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 180 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 337-589 |
Cow position: | chr19:1663637-1663383 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 340-522 |
Cow position: | chr19:21337339-21337526 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 143 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 377-589 |
Cow position: | chr19:48478091-48477880 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 167 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 68, 133 |
Conread position: | 381-581 |
Cow position: | chr19:50020438-50020642 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 154 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 75, 124 |
Conread position: | 396-589 |
Cow position: | chr19:55378403-55378206 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 146 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 58, 139 |
Show alignments to all cow chromosomes.