Cow genome map
| Conread name: | rcbl0_019776.y1 |
| Conread position: | 2-583 |
| Cow position: | chr25:26914837-26914234 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 146 |
| Conread position: | 3-436 |
| Cow position: | chr25:32606926-32607359 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 93 |
| Conread position: | 3-456 |
| Cow position: | chr25:2046958-2047438 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 148 |
| Conread position: | 3-503 |
| Cow position: | chr25:41366566-41367065 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 107 |
| Conread position: | 3-572 |
| Cow position: | chr25:18490670-18490078 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 3-580 |
| Cow position: | chr25:11956420-11955835 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 35 |
| Conread position: | 3-580 |
| Cow position: | chr25:18474793-18474211 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 147 |
| Conread position: | 3-581 |
| Cow position: | chr25:28264938-28264351 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 12 |
| Conread position: | 3-587 |
| Cow position: | chr25:4522224-4522815 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 3-588 |
| Cow position: | chr25:9055258-9054668 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-589 |
| Cow position: | chr25:10137423-10136818 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 323 |
| Conread position: | 3-589 |
| Cow position: | chr25:12081759-12082352 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 3-589 |
| Cow position: | chr25:17658208-17657614 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 3-589 |
| Cow position: | chr25:19367102-19367701 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 3-589 |
| Cow position: | chr25:20076085-20075474 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 3-589 |
| Cow position: | chr25:23394459-23393867 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 28 |
| Conread position: | 3-589 |
| Cow position: | chr25:26282623-26282019 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-589 |
| Cow position: | chr25:27231945-27231353 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 3-589 |
| Cow position: | chr25:33838981-33838377 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 3-589 |
| Cow position: | chr25:39386236-39386835 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 4-581 |
| Cow position: | chr25:20496127-20495559 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 4-589 |
| Cow position: | chr25:28863467-28862866 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 143 |
| Conread position: | 5-481 |
| Cow position: | chr25:21950718-21950234 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 81 |
| Conread position: | 9-397 |
| Cow position: | chr25:33978821-33979215 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 9-430 |
| Cow position: | chr25:5568182-5568617 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 42, 144 |
| Conread position: | 9-452 |
| Cow position: | chr25:26682152-26681712 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 44 |
| Conread position: | 9-580 |
| Cow position: | chr25:41121597-41121009 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 143 |
| Conread position: | 9-580 |
| Cow position: | chr25:41135165-41135741 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 138 |
| Conread position: | 9-584 |
| Cow position: | chr25:24636555-24637142 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 9-587 |
| Cow position: | chr25:16922206-16922793 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 9-589 |
| Cow position: | chr25:8655882-8655284 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-589 |
| Cow position: | chr25:12755845-12756430 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-589 |
| Cow position: | chr25:19924112-19923521 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 9-589 |
| Cow position: | chr25:24227759-24228341 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 9-589 |
| Cow position: | chr25:29802152-29802751 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 138 |
| Conread position: | 9-589 |
| Cow position: | chr25:34163969-34164567 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-589 |
| Cow position: | chr25:35554261-35553664 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 11-579 |
| Cow position: | chr25:29312728-29313313 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 345 |
| Conread position: | 12-580 |
| Cow position: | chr25:17992557-17993137 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 135 |
| Conread position: | 13-457 |
| Cow position: | chr25:35612750-35613204 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 118 |
| Conread position: | 13-589 |
| Cow position: | chr25:40321709-40322296 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 14-589 |
| Cow position: | chr25:13960647-13960061 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 133 |
| Conread position: | 17-575 |
| Cow position: | chr25:16802022-16801449 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 132 |
| Conread position: | 27-580 |
| Cow position: | chr25:18270025-18269477 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 27-589 |
| Cow position: | chr25:7800588-7800018 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 129 |
| Conread position: | 27-589 |
| Cow position: | chr25:14755840-14756415 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 28-589 |
| Cow position: | chr25:25827023-25826442 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 38-589 |
| Cow position: | chr25:11044178-11043615 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 108 |
| Conread position: | 44-580 |
| Cow position: | chr25:37593959-37593409 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 72 |
| Conread position: | 45-589 |
| Cow position: | chr25:34673029-34673592 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 230 |
| Conread position: | 64-589 |
| Cow position: | chr25:19336790-19337331 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 82 |
| Conread position: | 96-579 |
| Cow position: | chr25:18424794-18424302 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 86, 65 |
| Conread position: | 104-589 |
| Cow position: | chr25:13787461-13786968 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 151-488 |
| Cow position: | chr25:34768132-34767787 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 58, 195 |
| Conread position: | 157-589 |
| Cow position: | chr25:26353341-26353790 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 185 |
| Conread position: | 209-589 |
| Cow position: | chr25:3172037-3172405 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 211-588 |
| Cow position: | chr25:40389359-40389738 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 118 |
| Conread position: | 211-589 |
| Cow position: | chr25:6955445-6955062 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 211-589 |
| Cow position: | chr25:9395789-9395404 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 128 |
| Conread position: | 211-589 |
| Cow position: | chr25:19682666-19682289 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 83, 249 |
| Conread position: | 211-589 |
| Cow position: | chr25:22151483-22151099 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 129 |
| Conread position: | 217-417 |
| Cow position: | chr25:27535810-27536017 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 222-589 |
| Cow position: | chr25:37648782-37648426 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 232-589 |
| Cow position: | chr25:26923195-26922835 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 242-589 |
| Cow position: | chr25:2516353-2516002 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 262 |
| Conread position: | 259-582 |
| Cow position: | chr25:23366997-23366665 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 265-567 |
| Cow position: | chr25:34668272-34667964 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 272-532 |
| Cow position: | chr25:33039169-33039429 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 68 |
| Conread position: | 307-580 |
| Cow position: | chr25:34502941-34503218 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 340-589 |
| Cow position: | chr25:32577412-32577668 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 341-589 |
| Cow position: | chr25:23998941-23999189 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 349-584 |
| Cow position: | chr25:26931337-26931096 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 362-589 |
| Cow position: | chr25:20633988-20633755 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 367-589 |
| Cow position: | chr25:10633787-10634012 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 68, 46 |
| Conread position: | 413-580 |
| Cow position: | chr25:28420527-28420701 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 447-589 |
| Cow position: | chr25:35571956-35571813 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 102, 83 |
| Conread position: | 465-589 |
| Cow position: | chr25:21949917-21949792 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
Show alignments to all cow chromosomes.