Cow genome map
| Conread name: | rcbl0_019776.y1 |
| Conread position: | 2-468 |
| Cow position: | chr26:30652517-30653001 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 3-476 |
| Cow position: | chr26:9867518-9867976 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 306 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 304, 35 |
| Conread position: | 3-513 |
| Cow position: | chr26:12965039-12965527 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 40 |
| Conread position: | 3-578 |
| Cow position: | chr26:26281630-26281049 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 373 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 3-580 |
| Cow position: | chr26:5680394-5679790 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-580 |
| Cow position: | chr26:6430421-6429845 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 3-580 |
| Cow position: | chr26:17328024-17327422 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 150 |
| Conread position: | 3-581 |
| Cow position: | chr26:14173912-14173322 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 3-589 |
| Cow position: | chr26:8738562-8739167 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-589 |
| Cow position: | chr26:11370542-11369947 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 3-589 |
| Cow position: | chr26:12125720-12126301 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 151 |
| Conread position: | 3-589 |
| Cow position: | chr26:22831184-22831786 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-589 |
| Cow position: | chr26:31138112-31138696 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 4-560 |
| Cow position: | chr26:21859436-21858875 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 153 |
| Conread position: | 9-421 |
| Cow position: | chr26:15561363-15561775 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 295 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 9-580 |
| Cow position: | chr26:3187598-3187019 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 137 |
| Conread position: | 9-587 |
| Cow position: | chr26:18929124-18928534 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-589 |
| Cow position: | chr26:1089027-1088434 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 9-589 |
| Cow position: | chr26:8307907-8308514 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 9-589 |
| Cow position: | chr26:13806180-13806777 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 9-589 |
| Cow position: | chr26:18857964-18857370 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 139 |
| Conread position: | 9-589 |
| Cow position: | chr26:20019942-20019351 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-589 |
| Cow position: | chr26:22692234-22691640 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-589 |
| Cow position: | chr26:23890251-23889662 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 9-589 |
| Cow position: | chr26:26286714-26286109 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 144 |
| Conread position: | 9-589 |
| Cow position: | chr26:29434081-29433482 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-589 |
| Cow position: | chr26:34265813-34265214 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 10-589 |
| Cow position: | chr26:9063942-9063337 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 120 |
| Conread position: | 10-589 |
| Cow position: | chr26:17288652-17288060 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 151 |
| Conread position: | 11-408 |
| Cow position: | chr26:31794378-31793973 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 327 |
| Conread position: | 12-583 |
| Cow position: | chr26:30786772-30786185 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 135 |
| Conread position: | 12-589 |
| Cow position: | chr26:1390828-1390232 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 182 |
| Conread position: | 12-589 |
| Cow position: | chr26:8084672-8084076 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 12-589 |
| Cow position: | chr26:9115884-9115289 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 12-589 |
| Cow position: | chr26:24239544-24238951 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 333 |
| Conread position: | 12-589 |
| Cow position: | chr26:25393630-25393036 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 30-522 |
| Cow position: | chr26:11296576-11297085 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 30-581 |
| Cow position: | chr26:17169650-17169089 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 33-589 |
| Cow position: | chr26:614407-614954 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 49-580 |
| Cow position: | chr26:30725101-30725658 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 97 |
| Conread position: | 50-584 |
| Cow position: | chr26:27986786-27987334 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 227 |
| Conread position: | 52-580 |
| Cow position: | chr26:20497345-20496796 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 94 |
| Conread position: | 52-587 |
| Cow position: | chr26:18877577-18877059 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 70 |
| Conread position: | 69-580 |
| Cow position: | chr26:4323933-4324454 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 11 |
| Conread position: | 69-589 |
| Cow position: | chr26:387466-386930 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 80 |
| Conread position: | 69-589 |
| Cow position: | chr26:9070350-9069811 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 77 |
| Conread position: | 71-456 |
| Cow position: | chr26:755597-755985 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 94-556 |
| Cow position: | chr26:30585597-30586071 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 52 |
| Conread position: | 97-507 |
| Cow position: | chr26:13976372-13976772 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 121-580 |
| Cow position: | chr26:14487528-14487997 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 209-589 |
| Cow position: | chr26:11269848-11269472 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 211-476 |
| Cow position: | chr26:6837242-6836985 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 153, 91 |
| Conread position: | 211-503 |
| Cow position: | chr26:16720111-16719811 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 211-541 |
| Cow position: | chr26:10124528-10124846 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 159, 89 |
| Conread position: | 211-580 |
| Cow position: | chr26:13773677-13773311 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 55 |
| Conread position: | 211-588 |
| Cow position: | chr26:9694164-9694545 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 107 |
| Conread position: | 211-589 |
| Cow position: | chr26:10698882-10699248 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 211-589 |
| Cow position: | chr26:17428841-17429225 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 112 |
| Conread position: | 216-589 |
| Cow position: | chr26:9836100-9835718 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 217-489 |
| Cow position: | chr26:8653502-8653773 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 217-574 |
| Cow position: | chr26:3556502-3556843 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 27 |
| Conread position: | 217-589 |
| Cow position: | chr26:1885645-1885262 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 217 |
| Conread position: | 221-587 |
| Cow position: | chr26:2202152-2201782 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 102 |
| Conread position: | 232-588 |
| Cow position: | chr26:3923885-3924228 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 81 |
| Conread position: | 261-579 |
| Cow position: | chr26:2670236-2670557 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 272-502 |
| Cow position: | chr26:21823035-21823267 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 330-580 |
| Cow position: | chr26:17182577-17182343 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 332-511 |
| Cow position: | chr26:12652398-12652580 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 348-589 |
| Cow position: | chr26:1915837-1915592 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 86, 181 |
| Conread position: | 349-587 |
| Cow position: | chr26:20186798-20186574 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 349-589 |
| Cow position: | chr26:16781672-16781424 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 351-584 |
| Cow position: | chr26:783759-784006 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 364-580 |
| Cow position: | chr26:46169-46390 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 374-581 |
| Cow position: | chr26:12668904-12668704 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 136, 58 |
| Conread position: | 392-589 |
| Cow position: | chr26:3157568-3157365 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 143 |
Show alignments to all cow chromosomes.