Cow genome map
| Conread name: | rcbl0_019776.y1 |
| Conread position: | 2-502 |
| Cow position: | chr27:21283441-21283958 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 145 |
| Conread position: | 3-376 |
| Cow position: | chr27:8430060-8429676 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 3-417 |
| Cow position: | chr27:16823167-16823585 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 294 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 49, 97 |
| Conread position: | 3-456 |
| Cow position: | chr27:6620557-6621003 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 3-482 |
| Cow position: | chr27:13409805-13409307 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 350 |
| Conread position: | 3-512 |
| Cow position: | chr27:28984580-28984051 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 148 |
| Conread position: | 3-542 |
| Cow position: | chr27:27053688-27054242 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 3-569 |
| Cow position: | chr27:26785621-26785044 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-572 |
| Cow position: | chr27:14670020-14669413 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 290 |
| Conread position: | 3-576 |
| Cow position: | chr27:30677280-30677860 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 3-581 |
| Cow position: | chr27:9262469-9263064 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 3-583 |
| Cow position: | chr27:15272267-15272857 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 3-589 |
| Cow position: | chr27:2332310-2331708 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-589 |
| Cow position: | chr27:4330942-4331535 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 3-589 |
| Cow position: | chr27:13901933-13901329 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-589 |
| Cow position: | chr27:25112969-25112367 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 40 |
| Conread position: | 3-589 |
| Cow position: | chr27:27728684-27729282 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 144 |
| Conread position: | 4-580 |
| Cow position: | chr27:11481739-11481146 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 9-407 |
| Cow position: | chr27:10321863-10321457 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 155 |
| Conread position: | 9-408 |
| Cow position: | chr27:12191076-12190666 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 9-499 |
| Cow position: | chr27:10324131-10324628 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 138 |
| Conread position: | 9-562 |
| Cow position: | chr27:9090428-9089878 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 71 |
| Conread position: | 9-577 |
| Cow position: | chr27:1502297-1501732 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 147 |
| Conread position: | 9-580 |
| Cow position: | chr27:8973249-8972659 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 278 |
| Conread position: | 9-581 |
| Cow position: | chr27:12277910-12277324 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-581 |
| Cow position: | chr27:17564866-17565420 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 9-581 |
| Cow position: | chr27:18954838-18954257 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 136 |
| Conread position: | 9-589 |
| Cow position: | chr27:165118-165714 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 9-589 |
| Cow position: | chr27:1521483-1520885 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 332 |
| Conread position: | 9-589 |
| Cow position: | chr27:3652896-3653495 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 9-589 |
| Cow position: | chr27:10306909-10306323 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 141 |
| Conread position: | 9-589 |
| Cow position: | chr27:13354110-13353511 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 9-589 |
| Cow position: | chr27:16030594-16031192 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-589 |
| Cow position: | chr27:24295456-24296064 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 12-580 |
| Cow position: | chr27:21350645-21350063 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 12-584 |
| Cow position: | chr27:11434961-11434386 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 112 |
| Conread position: | 12-589 |
| Cow position: | chr27:20811217-20810626 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 13-537 |
| Cow position: | chr27:8296880-8297416 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 359 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 37, 207 |
| Conread position: | 17-589 |
| Cow position: | chr27:9333466-9332882 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 133 |
| Conread position: | 27-589 |
| Cow position: | chr27:5914719-5914138 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 27-589 |
| Cow position: | chr27:19931772-19932361 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 120 |
| Conread position: | 27-589 |
| Cow position: | chr27:26330712-26330137 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 119 |
| Conread position: | 29-581 |
| Cow position: | chr27:2557211-2557775 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 117 |
| Conread position: | 45-576 |
| Cow position: | chr27:25783997-25784535 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 110 |
| Conread position: | 69-579 |
| Cow position: | chr27:8427613-8427074 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 364 |
| Conread position: | 83-416 |
| Cow position: | chr27:30176784-30177130 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 126, 63 |
| Conread position: | 211-491 |
| Cow position: | chr27:2936411-2936130 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 54 |
| Conread position: | 211-568 |
| Cow position: | chr27:2682111-2681747 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 211-572 |
| Cow position: | chr27:27557387-27557025 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 105 |
| Conread position: | 211-580 |
| Cow position: | chr27:4982949-4982587 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 79 |
| Conread position: | 211-580 |
| Cow position: | chr27:30036467-30036084 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 211-589 |
| Cow position: | chr27:5983442-5983825 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 211-589 |
| Cow position: | chr27:6523694-6524073 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 60 |
| Conread position: | 211-589 |
| Cow position: | chr27:21392614-21392217 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 32 |
| Conread position: | 211-589 |
| Cow position: | chr27:27930790-27930413 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 45 |
| Conread position: | 211-589 |
| Cow position: | chr27:31546961-31547332 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 245, 88 |
| Conread position: | 212-581 |
| Cow position: | chr27:15406207-15405839 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 90 |
| Conread position: | 214-589 |
| Cow position: | chr27:19423804-19424172 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 217-580 |
| Cow position: | chr27:3990218-3990585 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 122 |
| Conread position: | 217-589 |
| Cow position: | chr27:15866724-15867090 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 81 |
| Conread position: | 221-568 |
| Cow position: | chr27:13317134-13316786 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 119 |
| Conread position: | 221-580 |
| Cow position: | chr27:12239646-12239283 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 110 |
| Conread position: | 221-589 |
| Cow position: | chr27:15633764-15634137 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 78 |
| Conread position: | 232-589 |
| Cow position: | chr27:8592941-8592586 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 233-589 |
| Cow position: | chr27:9970738-9970376 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 90 |
| Conread position: | 237-568 |
| Cow position: | chr27:25791976-25792324 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 252-581 |
| Cow position: | chr27:1536718-1536384 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 86 |
| Conread position: | 255-542 |
| Cow position: | chr27:27192805-27193094 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 271-584 |
| Cow position: | chr27:3642942-3643248 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 177, 9 |
| Conread position: | 272-555 |
| Cow position: | chr27:2848908-2849180 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 280-587 |
| Cow position: | chr27:20765252-20764955 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 307-589 |
| Cow position: | chr27:14380795-14380509 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 314-580 |
| Cow position: | chr27:4389475-4389218 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 56, 106 |
| Conread position: | 333-580 |
| Cow position: | chr27:15870551-15870795 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 336-581 |
| Cow position: | chr27:16787833-16788084 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 337-588 |
| Cow position: | chr27:29467392-29467136 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 141 |
| Conread position: | 351-589 |
| Cow position: | chr27:15375252-15375019 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 231, 110 |
| Conread position: | 390-589 |
| Cow position: | chr27:25971190-25971396 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 392-575 |
| Cow position: | chr27:526343-526155 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 459-589 |
| Cow position: | chr27:15544351-15544220 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
Show alignments to all cow chromosomes.