Cow genome map

Conread name: rcbl0_019776.y1

Conread position: 1-502
Cow position: chr4:25972483-25971962 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 2-589
Cow position: chr4:47116384-47115777 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 146

Conread position: 3-448
Cow position: chr4:51122578-51122127 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 3-456
Cow position: chr4:18974030-18973574 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 97

Conread position: 3-507
Cow position: chr4:22743927-22743413 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 85

Conread position: 3-519
Cow position: chr4:61816858-61817392 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-521
Cow position: chr4:43898350-43898871 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 133

Conread position: 3-566
Cow position: chr4:359428-358845 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-568
Cow position: chr4:11107544-11108115 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 3-579
Cow position: chr4:61625043-61625614 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-580
Cow position: chr4:1499552-1500138 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 67

Conread position: 3-580
Cow position: chr4:17877505-17876908 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 146

Conread position: 3-580
Cow position: chr4:39458214-39457611 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 144

Conread position: 3-580
Cow position: chr4:57988289-57987696 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-583
Cow position: chr4:61651007-61651608 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 142

Conread position: 3-587
Cow position: chr4:962067-962645 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 34

Conread position: 3-588
Cow position: chr4:2601745-2601154 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-588
Cow position: chr4:41097501-41096921 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 64

Conread position: 3-589
Cow position: chr4:3475200-3474617 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 40

Conread position: 3-589
Cow position: chr4:3850140-3849540 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 139

Conread position: 3-589
Cow position: chr4:10122952-10122347 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 3-589
Cow position: chr4:10885181-10884581 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 55

Conread position: 3-589
Cow position: chr4:16642360-16641759 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 86

Conread position: 3-589
Cow position: chr4:19957573-19956966 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr4:22317285-22316666 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 473

Conread position: 3-589
Cow position: chr4:27178368-27177769 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 3-589
Cow position: chr4:27540209-27539606 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 153

Conread position: 3-589
Cow position: chr4:34223480-34222893 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-589
Cow position: chr4:34713361-34712758 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr4:36025725-36026330 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr4:36755305-36754726 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr4:36899921-36899317 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr4:37786846-37786243 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 146

Conread position: 3-589
Cow position: chr4:43840436-43841037 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 73

Conread position: 3-589
Cow position: chr4:43884631-43884034 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 90

Conread position: 3-589
Cow position: chr4:65919211-65918630 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 144

Conread position: 3-589
Cow position: chr4:67600134-67600727 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 35

Conread position: 4-576
Cow position: chr4:52086694-52086112 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 40

Conread position: 4-589
Cow position: chr4:54931084-54931665 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 142

Conread position: 5-506
Cow position: chr4:33644959-33645473 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 147

Conread position: 9-387
Cow position: chr4:48411370-48411760 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-414
Cow position: chr4:65464514-65464914 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 28

Conread position: 9-459
Cow position: chr4:31348630-31349089 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 64

Conread position: 9-560
Cow position: chr4:6446296-6445732 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 323

Conread position: 9-560
Cow position: chr4:22850139-22850704 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 9-580
Cow position: chr4:1007429-1006844 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 341

Conread position: 9-580
Cow position: chr4:54695496-54696079 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 9-581
Cow position: chr4:44901805-44901206 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 149

Conread position: 9-587
Cow position: chr4:35930009-35929425 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 147

Conread position: 9-588
Cow position: chr4:533828-533232 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 331

Conread position: 9-588
Cow position: chr4:8674272-8673680 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 143

Conread position: 9-589
Cow position: chr4:607145-606546 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr4:2226226-2226822 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-589
Cow position: chr4:4419586-4418987 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:8678342-8677742 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 138

Conread position: 9-589
Cow position: chr4:10425017-10424433 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:15618234-15617635 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:18335407-18336009 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 9-589
Cow position: chr4:19265197-19264621 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 24

Conread position: 9-589
Cow position: chr4:23150119-23150716 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:30170815-30171425 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 293

Conread position: 9-589
Cow position: chr4:47264317-47263718 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-589
Cow position: chr4:49745211-49744612 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:54161527-54162122 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-447
Cow position: chr4:43070344-43069894 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 301
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 58, 72

Conread position: 10-579
Cow position: chr4:68796234-68795666 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 135

Conread position: 10-580
Cow position: chr4:41976086-41976693 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 409
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 42, 51

Conread position: 11-517
Cow position: chr4:45078536-45079061 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 325

Conread position: 11-569
Cow position: chr4:1061353-1061904 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 11-584
Cow position: chr4:10553781-10553191 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 320

Conread position: 11-588
Cow position: chr4:12605345-12605928 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 140

Conread position: 11-589
Cow position: chr4:38181267-38180700 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 12-584
Cow position: chr4:19237599-19237016 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 92

Conread position: 12-587
Cow position: chr4:17235556-17234964 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr4:4085841-4086423 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 12-589
Cow position: chr4:24140412-24139814 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 13-507
Cow position: chr4:46526578-46526098 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 111

Conread position: 14-589
Cow position: chr4:15873122-15873693 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 111

Conread position: 17-427
Cow position: chr4:21532046-21532468 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 139

Conread position: 20-540
Cow position: chr4:47774063-47774601 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 97

Conread position: 27-584
Cow position: chr4:3450320-3449748 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-589
Cow position: chr4:60652104-60651534 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 28-589
Cow position: chr4:17833326-17833899 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 91

Conread position: 28-589
Cow position: chr4:18096098-18096669 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 380
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 181, 127

Conread position: 29-584
Cow position: chr4:11918434-11919004 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 118

Conread position: 30-589
Cow position: chr4:25983801-25983230 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 124

Conread position: 33-589
Cow position: chr4:41962411-41961837 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 113

Conread position: 35-588
Cow position: chr4:33180785-33181346 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 102

Conread position: 37-493
Cow position: chr4:16966795-16967257 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 38-518
Cow position: chr4:21364751-21364264 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 67

Conread position: 38-581
Cow position: chr4:11193459-11192905 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 88

Conread position: 42-589
Cow position: chr4:16832049-16832609 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 75

Conread position: 45-512
Cow position: chr4:34383918-34384388 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 60

Conread position: 45-582
Cow position: chr4:7214294-7214828 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 352
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 104, 133

Conread position: 45-588
Cow position: chr4:15813822-15814352 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 78

Conread position: 45-589
Cow position: chr4:3252052-3252603 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 64

Conread position: 45-589
Cow position: chr4:26746003-26745459 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 51-456
Cow position: chr4:8441752-8442168 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 42

Conread position: 63-580
Cow position: chr4:20091600-20091055 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 92

Conread position: 63-589
Cow position: chr4:3283885-3284417 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 189

Conread position: 69-452
Cow position: chr4:18108322-18107925 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 77

Conread position: 69-580
Cow position: chr4:26400237-26399741 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 81

Conread position: 69-589
Cow position: chr4:60856239-60855701 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 72-580
Cow position: chr4:8769509-8768994 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 44

Conread position: 75-583
Cow position: chr4:25192398-25192930 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 101

Conread position: 88-533
Cow position: chr4:45239807-45239346 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 307
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 57

Conread position: 88-589
Cow position: chr4:21342533-21342014 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 58

Conread position: 97-589
Cow position: chr4:27997218-27996717 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 49

Conread position: 104-580
Cow position: chr4:67767861-67767370 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 12

Conread position: 104-589
Cow position: chr4:48497122-48496618 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 51

Conread position: 109-589
Cow position: chr4:67394647-67394168 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 37

Conread position: 111-589
Cow position: chr4:29530022-29530516 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 113-542
Cow position: chr4:45764553-45764992 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 149-589
Cow position: chr4:30508601-30508140 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 417

Conread position: 207-589
Cow position: chr4:54190094-54189711 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 125

Conread position: 211-333
Cow position: chr4:66548696-66548817 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 211-407
Cow position: chr4:36892003-36891809 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 119

Conread position: 211-579
Cow position: chr4:27292591-27292936 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 233, 43

Conread position: 211-580
Cow position: chr4:61724536-61724192 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 240, 56

Conread position: 211-587
Cow position: chr4:19141343-19140945 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 211-589
Cow position: chr4:5874392-5874039 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 39

Conread position: 211-589
Cow position: chr4:11100278-11100654 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 120

Conread position: 211-589
Cow position: chr4:17775438-17775827 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 283

Conread position: 211-589
Cow position: chr4:23304032-23304400 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 40

Conread position: 211-589
Cow position: chr4:35868522-35868135 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 176

Conread position: 211-589
Cow position: chr4:38564369-38564753 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr4:46529928-46530304 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-589
Cow position: chr4:47079089-47079463 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 89

Conread position: 211-589
Cow position: chr4:61235826-61236202 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 159, 91

Conread position: 211-589
Cow position: chr4:66174001-66174380 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 10

Conread position: 217-580
Cow position: chr4:16363519-16363151 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 113

Conread position: 217-587
Cow position: chr4:55509524-55509914 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 217-588
Cow position: chr4:20243475-20243098 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 123

Conread position: 217-589
Cow position: chr4:3170600-3170223 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 107

Conread position: 217-589
Cow position: chr4:61449835-61449454 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 321

Conread position: 218-584
Cow position: chr4:59783990-59783622 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 170

Conread position: 221-589
Cow position: chr4:1368756-1369118 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 221-589
Cow position: chr4:3961581-3961953 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 119

Conread position: 221-589
Cow position: chr4:68880838-68880454 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 325

Conread position: 224-589
Cow position: chr4:6167656-6168030 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 227-588
Cow position: chr4:1239118-1239480 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 261

Conread position: 231-589
Cow position: chr4:12751680-12751305 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 131, 71

Conread position: 232-581
Cow position: chr4:65842580-65842943 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 264

Conread position: 232-589
Cow position: chr4:26468528-26468172 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 236-589
Cow position: chr4:19049561-19049202 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 93

Conread position: 238-580
Cow position: chr4:6487070-6487416 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 102

Conread position: 240-512
Cow position: chr4:48798375-48798640 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 130, 62

Conread position: 241-589
Cow position: chr4:23451731-23452071 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 87

Conread position: 242-589
Cow position: chr4:21297491-21297840 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 52

Conread position: 245-589
Cow position: chr4:16605871-16606234 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 299

Conread position: 260-581
Cow position: chr4:36812285-36811971 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 60

Conread position: 267-589
Cow position: chr4:65581786-65581456 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 62

Conread position: 272-491
Cow position: chr4:43836095-43835879 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 272-589
Cow position: chr4:10822618-10822927 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 98, 36

Conread position: 272-589
Cow position: chr4:54973309-54972991 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 21

Conread position: 301-589
Cow position: chr4:58859373-58859662 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 135, 47

Conread position: 303-589
Cow position: chr4:45653940-45654231 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 103

Conread position: 313-589
Cow position: chr4:22724159-22723885 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 46

Conread position: 319-557
Cow position: chr4:55520569-55520327 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 129, 45

Conread position: 319-589
Cow position: chr4:17473300-17473028 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 82

Conread position: 329-587
Cow position: chr4:34166837-34167090 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 41, 50

Conread position: 329-589
Cow position: chr4:45499380-45499125 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 115

Conread position: 330-525
Cow position: chr4:14817528-14817728 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 124

Conread position: 330-585
Cow position: chr4:21364275-21364022 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 44

Conread position: 331-589
Cow position: chr4:25878625-25878364 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 235

Conread position: 332-584
Cow position: chr4:41038029-41037775 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 5

Conread position: 340-587
Cow position: chr4:9168898-9169149 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 36

Conread position: 340-589
Cow position: chr4:14539112-14539357 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 144

Conread position: 340-589
Cow position: chr4:65431467-65431222 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 342-568
Cow position: chr4:15463237-15463467 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 80

Conread position: 348-578
Cow position: chr4:32911-33140 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 81

Conread position: 351-506
Cow position: chr4:56369934-56369769 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 352-589
Cow position: chr4:14919221-14918998 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 93

Conread position: 360-589
Cow position: chr4:34175805-34176041 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 364-589
Cow position: chr4:6000262-6000492 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 212

Conread position: 373-589
Cow position: chr4:21843357-21843579 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 162

Conread position: 383-589
Cow position: chr4:27293943-27294147 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 30

Conread position: 383-589
Cow position: chr4:61192134-61191929 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 117

Conread position: 391-566
Cow position: chr4:4126879-4126702 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 392-568
Cow position: chr4:5578678-5578859 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 396-581
Cow position: chr4:12455103-12454914 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 114

Conread position: 396-581
Cow position: chr4:13254804-13254615 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 170

Conread position: 396-587
Cow position: chr4:41957901-41957704 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 139

Conread position: 404-589
Cow position: chr4:1047132-1047323 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 131

Conread position: 419-566
Cow position: chr4:50977640-50977492 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 429-580
Cow position: chr4:14142409-14142258 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 18

Conread position: 447-584
Cow position: chr4:20606718-20606581 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 447-589
Cow position: chr4:32215237-32215095 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 37

Show alignments to all cow chromosomes.