Non-Coding RNA Search

Cow genome map


           Conread name:
           rcbl_0644.y1
        

               Conread position:
               1-182
               

               Cow position:
               chr21:44861126-44860944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 111
               

               Conread position:
               1-184
               

               Cow position:
               chr21:5898420-5898225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               1-184
               

               Cow position:
               chr21:9334471-9334664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr21:5970851-5970659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr21:13395583-13395780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               86, 49
               

               Conread position:
               1-195
               

               Cow position:
               chr21:38720231-38720435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 146
               

               Conread position:
               1-197
               

               Cow position:
               chr21:45473767-45473567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               92, 56
               

               Conread position:
               1-198
               

               Cow position:
               chr21:25344851-25345052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               1-198
               

               Cow position:
               chr21:28989593-28989803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 139
               

               Conread position:
               1-201
               

               Cow position:
               chr21:3585382-3585173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr21:4281892-4281686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               1-201
               

               Cow position:
               chr21:6051486-6051699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr21:42007478-42007268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr21:44251856-44251649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr21:10978953-10978750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               1-206
               

               Cow position:
               chr21:21686404-21686614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               39, 155
               

               Conread position:
               1-206
               

               Cow position:
               chr21:36696103-36695891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr21:16604333-16604117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr21:30231712-30231499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 159
               

               Conread position:
               1-208
               

               Cow position:
               chr21:44214109-44214328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr21:868946-868722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               18, 195
               

               Conread position:
               1-209
               

               Cow position:
               chr21:33562993-33563203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               1-215
               

               Cow position:
               chr21:44825906-44825677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr21:22718799-22718567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               1-231
               

               Cow position:
               chr21:26648024-26647793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               47, 98
               

               Conread position:
               1-232
               

               Cow position:
               chr21:10538265-10538028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               57, 42
               

               Conread position:
               1-234
               

               Cow position:
               chr21:27624694-27624926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               1-237
               

               Cow position:
               chr21:47363753-47363508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               21, 192
               

               Conread position:
               1-259
               

               Cow position:
               chr21:734575-734843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               1-296
               

               Cow position:
               chr21:26244905-26245185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               1-304
               

               Cow position:
               chr21:33350725-33351034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 249
               

               Conread position:
               1-307
               

               Cow position:
               chr21:40432435-40432730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               1-308
               

               Cow position:
               chr21:30256285-30255990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 134
               

               Conread position:
               1-310
               

               Cow position:
               chr21:28924095-28924393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               21, 188
               

               Conread position:
               1-311
               

               Cow position:
               chr21:46132563-46132862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               2-197
               

               Cow position:
               chr21:42022262-42022463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 183
               

               Conread position:
               3-196
               

               Cow position:
               chr21:11779544-11779352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               3-196
               

               Cow position:
               chr21:44565733-44565533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               3-201
               

               Cow position:
               chr21:41579741-41579950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               34, 162
               

               Conread position:
               3-307
               

               Cow position:
               chr21:27569184-27568893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               4-186
               

               Cow position:
               chr21:17062919-17063101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               5-165
               

               Cow position:
               chr21:41878462-41878627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               53, 132
               

               Conread position:
               5-173
               

               Cow position:
               chr21:36789782-36789962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               5-176
               

               Cow position:
               chr21:13036909-13036737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               5-176
               

               Cow position:
               chr21:21907438-21907265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 102
               

               Conread position:
               5-176
               

               Cow position:
               chr21:45915719-45915549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               5-179
               

               Cow position:
               chr21:8235563-8235390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 38
               

               Conread position:
               5-182
               

               Cow position:
               chr21:42414110-42413922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               5-184
               

               Cow position:
               chr21:5426932-5427114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 152
               

               Conread position:
               5-188
               

               Cow position:
               chr21:10001066-10001256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               5-188
               

               Cow position:
               chr21:30835354-30835544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               5-188
               

               Cow position:
               chr21:34654067-34654254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               5-188
               

               Cow position:
               chr21:40589494-40589301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 12
               

               Conread position:
               5-188
               

               Cow position:
               chr21:42209640-42209448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               5-189
               

               Cow position:
               chr21:6387991-6388181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 158
               

               Conread position:
               5-189
               

               Cow position:
               chr21:9416239-9416431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 178
               

               Conread position:
               5-189
               

               Cow position:
               chr21:29069338-29069144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               5-193
               

               Cow position:
               chr21:20152945-20153140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               43, 164
               

               Conread position:
               5-194
               

               Cow position:
               chr21:18064923-18064731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               58, 143
               

               Conread position:
               5-195
               

               Cow position:
               chr21:38900769-38900960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               5-196
               

               Cow position:
               chr21:977154-976952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               5-196
               

               Cow position:
               chr21:8426437-8426634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               5-196
               

               Cow position:
               chr21:10823558-10823748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               5-196
               

               Cow position:
               chr21:22210253-22210060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 177
               

               Conread position:
               5-196
               

               Cow position:
               chr21:38449456-38449260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               5-196
               

               Cow position:
               chr21:47760760-47760957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               5-197
               

               Cow position:
               chr21:5464738-5464938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 180
               

               Conread position:
               5-197
               

               Cow position:
               chr21:15976624-15976822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               41, 139
               

               Conread position:
               5-197
               

               Cow position:
               chr21:46849136-46848938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               5-197
               

               Cow position:
               chr21:47465130-47464930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               44, 139
               

               Conread position:
               5-198
               

               Cow position:
               chr21:957663-957861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 160
               

               Conread position:
               5-198
               

               Cow position:
               chr21:1511282-1511480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 105
               

               Conread position:
               5-198
               

               Cow position:
               chr21:6997931-6998139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               5-198
               

               Cow position:
               chr21:10118550-10118755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               5-198
               

               Cow position:
               chr21:19060096-19059899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               5-198
               

               Cow position:
               chr21:23586871-23587072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               43, 164
               

               Conread position:
               5-198
               

               Cow position:
               chr21:25628919-25628721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               35, 154
               

               Conread position:
               5-198
               

               Cow position:
               chr21:29978769-29978568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               5-198
               

               Cow position:
               chr21:33982815-33982618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 109
               

               Conread position:
               5-199
               

               Cow position:
               chr21:15544227-15544040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 75
               

               Conread position:
               5-200
               

               Cow position:
               chr21:29014922-29014717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               5-201
               

               Cow position:
               chr21:641577-641781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-201
               

               Cow position:
               chr21:802316-802123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               88, 37
               

               Conread position:
               5-201
               

               Cow position:
               chr21:11644979-11644771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               5-201
               

               Cow position:
               chr21:13585063-13584867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               5-201
               

               Cow position:
               chr21:27521340-27521146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               5-201
               

               Cow position:
               chr21:28030279-28030482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               5-202
               

               Cow position:
               chr21:4399794-4399998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               5-202
               

               Cow position:
               chr21:17890294-17890499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 38
               

               Conread position:
               5-204
               

               Cow position:
               chr21:7768425-7768635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               5-204
               

               Cow position:
               chr21:8349319-8349525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               5-204
               

               Cow position:
               chr21:30222334-30222542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-205
               

               Cow position:
               chr21:28733923-28733715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               5-206
               

               Cow position:
               chr21:17875200-17874994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               5-206
               

               Cow position:
               chr21:21169501-21169297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               54, 103
               

               Conread position:
               5-207
               

               Cow position:
               chr21:3177844-3178046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               5-207
               

               Cow position:
               chr21:10004896-10004686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 121
               

               Conread position:
               5-207
               

               Cow position:
               chr21:10264023-10264232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               5-207
               

               Cow position:
               chr21:23672741-23672943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 90
               

               Conread position:
               5-207
               

               Cow position:
               chr21:32339746-32339540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               5-207
               

               Cow position:
               chr21:38918194-38918399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               5-207
               

               Cow position:
               chr21:41621115-41621325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               5-207
               

               Cow position:
               chr21:47714014-47713809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               5-208
               

               Cow position:
               chr21:10410211-10410423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               43, 120
               

               Conread position:
               5-209
               

               Cow position:
               chr21:19513856-19514056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               5-209
               

               Cow position:
               chr21:42841609-42841395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               5-213
               

               Cow position:
               chr21:18790568-18790360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               5-214
               

               Cow position:
               chr21:28237721-28237501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               5-215
               

               Cow position:
               chr21:13089479-13089266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               5-215
               

               Cow position:
               chr21:47764124-47763912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               5-218
               

               Cow position:
               chr21:10633649-10633432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 113
               

               Conread position:
               5-219
               

               Cow position:
               chr21:41974384-41974170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 104
               

               Conread position:
               5-221
               

               Cow position:
               chr21:15911391-15911612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               5-229
               

               Cow position:
               chr21:42135629-42135395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 220
               

               Conread position:
               5-230
               

               Cow position:
               chr21:37345106-37344876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               5-231
               

               Cow position:
               chr21:12801761-12801525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 184
               

               Conread position:
               5-237
               

               Cow position:
               chr21:395861-396099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               5-301
               

               Cow position:
               chr21:36795591-36795884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               48, 219
               

               Conread position:
               5-304
               

               Cow position:
               chr21:30250205-30249914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               88, 41
               

               Conread position:
               5-304
               

               Cow position:
               chr21:36909926-36910214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               44, 53
               

               Conread position:
               5-304
               

               Cow position:
               chr21:39401585-39401906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 38
               

               Conread position:
               5-307
               

               Cow position:
               chr21:30980587-30980293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               36, 193
               

               Conread position:
               5-309
               

               Cow position:
               chr21:44671742-44672042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               5-311
               

               Cow position:
               chr21:13365329-13365635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               17, 198
               

               Conread position:
               6-189
               

               Cow position:
               chr21:41046796-41046988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               6-215
               

               Cow position:
               chr21:29405223-29405017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               77, 37
               

               Conread position:
               6-226
               

               Cow position:
               chr21:471669-471891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               49, 37
               

               Conread position:
               6-227
               

               Cow position:
               chr21:7394374-7394594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 104
               

               Conread position:
               6-270
               

               Cow position:
               chr21:18940584-18940316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               7-177
               

               Cow position:
               chr21:31253537-31253703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               7-186
               

               Cow position:
               chr21:15584427-15584240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               7-196
               

               Cow position:
               chr21:20160671-20160865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               7-196
               

               Cow position:
               chr21:28919531-28919339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 140
               

               Conread position:
               7-196
               

               Cow position:
               chr21:41597814-41598000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               7-201
               

               Cow position:
               chr21:30607096-30606901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 153
               

               Conread position:
               7-207
               

               Cow position:
               chr21:40266117-40266321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               7-212
               

               Cow position:
               chr21:10114340-10114129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               7-244
               

               Cow position:
               chr21:2657799-2658047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               8-198
               

               Cow position:
               chr21:14760566-14760756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               44, 76
               

               Conread position:
               11-196
               

               Cow position:
               chr21:24797660-24797843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 33
               

               Conread position:
               11-206
               

               Cow position:
               chr21:13842483-13842689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               12-189
               

               Cow position:
               chr21:32559365-32559183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               12-198
               

               Cow position:
               chr21:9990506-9990701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               12-201
               

               Cow position:
               chr21:3361017-3360821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               10, 70
               

               Conread position:
               12-201
               

               Cow position:
               chr21:8431104-8430906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               12-223
               

               Cow position:
               chr21:7686793-7686596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               12-293
               

               Cow position:
               chr21:1764866-1764606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               13-188
               

               Cow position:
               chr21:28810264-28810081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               13-189
               

               Cow position:
               chr21:5153625-5153802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               13-201
               

               Cow position:
               chr21:643321-643518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               13-207
               

               Cow position:
               chr21:37299455-37299662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               14-201
               

               Cow position:
               chr21:23535711-23535903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               14-207
               

               Cow position:
               chr21:71583-71783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 146
               

               Conread position:
               15-187
               

               Cow position:
               chr21:21077609-21077780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               75, 22
               

               Conread position:
               15-195
               

               Cow position:
               chr21:38121100-38121289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               15-196
               

               Cow position:
               chr21:49700035-49699851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               15-207
               

               Cow position:
               chr21:14452235-14452434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               17-189
               

               Cow position:
               chr21:1059081-1059258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               17-201
               

               Cow position:
               chr21:19258828-19259011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               17-202
               

               Cow position:
               chr21:6624159-6624351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               17-204
               

               Cow position:
               chr21:29658282-29658474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               19-196
               

               Cow position:
               chr21:27341588-27341406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               19-204
               

               Cow position:
               chr21:10151802-10152002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               7, 150
               

               Conread position:
               20-168
               

               Cow position:
               chr21:4998480-4998334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               20-173
               

               Cow position:
               chr21:23460146-23460299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               20-176
               

               Cow position:
               chr21:33791360-33791213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               20-185
               

               Cow position:
               chr21:6758353-6758521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               20-187
               

               Cow position:
               chr21:34151590-34151761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               20-188
               

               Cow position:
               chr21:3400828-3400651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               20-188
               

               Cow position:
               chr21:28244475-28244651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               20-189
               

               Cow position:
               chr21:12739085-12739260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               20-196
               

               Cow position:
               chr21:23322072-23321889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               20-197
               

               Cow position:
               chr21:16152442-16152631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               20-197
               

               Cow position:
               chr21:36508247-36508424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 90
               

               Conread position:
               20-198
               

               Cow position:
               chr21:18779965-18779785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               39, 87
               

               Conread position:
               20-198
               

               Cow position:
               chr21:27863510-27863323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               20-201
               

               Cow position:
               chr21:938034-938213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               20-201
               

               Cow position:
               chr21:13588768-13588953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               20-201
               

               Cow position:
               chr21:44724359-44724179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               20-204
               

               Cow position:
               chr21:17642978-17642789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 114
               

               Conread position:
               20-204
               

               Cow position:
               chr21:45329939-45329754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               20-207
               

               Cow position:
               chr21:6834056-6834247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 166
               

               Conread position:
               20-207
               

               Cow position:
               chr21:8546012-8545823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               43, 75
               

               Conread position:
               20-207
               

               Cow position:
               chr21:17183929-17184117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               20-207
               

               Cow position:
               chr21:17193747-17193551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               35, 171
               

               Conread position:
               20-207
               

               Cow position:
               chr21:18568634-18568440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               26, 168
               

               Conread position:
               20-209
               

               Cow position:
               chr21:33727-33921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               20-209
               

               Cow position:
               chr21:7377921-7377726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 168
               

               Conread position:
               20-214
               

               Cow position:
               chr21:47044-47245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 180
               

               Conread position:
               20-223
               

               Cow position:
               chr21:24642526-24642728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               43, 131
               

               Conread position:
               20-237
               

               Cow position:
               chr21:7581896-7581675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               20-244
               

               Cow position:
               chr21:31159409-31159633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               20-304
               

               Cow position:
               chr21:42384516-42384799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 162
               

               Conread position:
               20-312
               

               Cow position:
               chr21:34390969-34390684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 179
               

               Conread position:
               21-186
               

               Cow position:
               chr21:40134167-40134336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               21-198
               

               Cow position:
               chr21:45971164-45970983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               21-215
               

               Cow position:
               chr21:40168620-40168419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 194
               

               Conread position:
               21-260
               

               Cow position:
               chr21:30157802-30157554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 164
               

               Conread position:
               22-196
               

               Cow position:
               chr21:39319406-39319221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               22-198
               

               Cow position:
               chr21:6713518-6713332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               22-204
               

               Cow position:
               chr21:41287787-41287596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               22-207
               

               Cow position:
               chr21:9477175-9477361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               24-222
               

               Cow position:
               chr21:19360167-19359961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               25-207
               

               Cow position:
               chr21:31652403-31652584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               25-207
               

               Cow position:
               chr21:41140706-41140518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               26-207
               

               Cow position:
               chr21:44829744-44829559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               29-201
               

               Cow position:
               chr21:43259236-43259413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               33-301
               

               Cow position:
               chr21:42562654-42562909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               44, 77
               

               Conread position:
               34-299
               

               Cow position:
               chr21:42463669-42463411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               35-179
               

               Cow position:
               chr21:7823381-7823536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               35-186
               

               Cow position:
               chr21:37706392-37706235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               35-208
               

               Cow position:
               chr21:23568248-23568429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               35-308
               

               Cow position:
               chr21:10514831-10515102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               36-204
               

               Cow position:
               chr21:37838040-37837869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 17
               

               Conread position:
               36-307
               

               Cow position:
               chr21:7268856-7268571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               36-315
               

               Cow position:
               chr21:20260294-20260023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 27
               

               Conread position:
               38-207
               

               Cow position:
               chr21:36763085-36763259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 149
               

               Conread position:
               38-308
               

               Cow position:
               chr21:2810131-2809865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               38-327
               

               Cow position:
               chr21:30119720-30120031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 268
               

               Conread position:
               39-204
               

               Cow position:
               chr21:42144851-42145021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 135
               

               Conread position:
               40-201
               

               Cow position:
               chr21:24875381-24875547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               40-226
               

               Cow position:
               chr21:11057848-11057664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               41-188
               

               Cow position:
               chr21:27081076-27081225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               41-189
               

               Cow position:
               chr21:7583880-7584032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               43-206
               

               Cow position:
               chr21:41610198-41610369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               43-226
               

               Cow position:
               chr21:42131322-42131136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               45-189
               

               Cow position:
               chr21:25383058-25383208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               45-201
               

               Cow position:
               chr21:8213244-8213089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               46-198
               

               Cow position:
               chr21:17252942-17252787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               46-201
               

               Cow position:
               chr21:44592173-44592016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               46-206
               

               Cow position:
               chr21:46809735-46809567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               46-207
               

               Cow position:
               chr21:27677514-27677680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               46-207
               

               Cow position:
               chr21:40475532-40475698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               46-212
               

               Cow position:
               chr21:36682361-36682530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               50-196
               

               Cow position:
               chr21:19868914-19868766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               51-234
               

               Cow position:
               chr21:7681139-7681325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               54-199
               

               Cow position:
               chr21:22939810-22939962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               54-201
               

               Cow position:
               chr21:40291703-40291554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 69
               

               Conread position:
               57-176
               

               Cow position:
               chr21:7221294-7221171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               57-176
               

               Cow position:
               chr21:35647782-35647659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               57-188
               

               Cow position:
               chr21:712988-713124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               57-197
               

               Cow position:
               chr21:25014980-25014843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               57-208
               

               Cow position:
               chr21:6153848-6154001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               57-303
               

               Cow position:
               chr21:13163905-13164141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 150
               

               Conread position:
               57-308
               

               Cow position:
               chr21:46470232-46470488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               59-196
               

               Cow position:
               chr21:7493219-7493084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               59-292
               

               Cow position:
               chr21:8978497-8978720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               60-207
               

               Cow position:
               chr21:2537090-2536939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               61-195
               

               Cow position:
               chr21:6736139-6736002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 123
               

               Conread position:
               61-196
               

               Cow position:
               chr21:11353115-11353249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               61-209
               

               Cow position:
               chr21:41040994-41041145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               61-292
               

               Cow position:
               chr21:14228230-14228009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               32, 132
               

               Conread position:
               62-196
               

               Cow position:
               chr21:30938621-30938477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               62-201
               

               Cow position:
               chr21:46612743-46612603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               62-207
               

               Cow position:
               chr21:37928700-37928849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               63-208
               

               Cow position:
               chr21:20318565-20318713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               64-188
               

               Cow position:
               chr21:8687090-8686962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               64-188
               

               Cow position:
               chr21:13225768-13225896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               66-311
               

               Cow position:
               chr21:5130313-5130044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               67-196
               

               Cow position:
               chr21:31659091-31658962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               67-297
               

               Cow position:
               chr21:265680-265916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               70-201
               

               Cow position:
               chr21:48482469-48482336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               72-196
               

               Cow position:
               chr21:42017540-42017414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               72-209
               

               Cow position:
               chr21:27744090-27744226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               73-204
               

               Cow position:
               chr21:41994985-41994853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               75-198
               

               Cow position:
               chr21:29418636-29418759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               76-231
               

               Cow position:
               chr21:28824159-28824002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               78-304
               

               Cow position:
               chr21:16928036-16927818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               42, 127
               

               Conread position:
               79-209
               

               Cow position:
               chr21:43265325-43265193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               80-251
               

               Cow position:
               chr21:28617861-28618030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               80-292
               

               Cow position:
               chr21:48478821-48478622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               80-300
               

               Cow position:
               chr21:25159243-25159452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 111
               

               Conread position:
               82-207
               

               Cow position:
               chr21:5214421-5214549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               82-304
               

               Cow position:
               chr21:12200175-12200414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               82-304
               

               Cow position:
               chr21:26658909-26658698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 110
               

               Conread position:
               86-189
               

               Cow position:
               chr21:5405894-5405998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               86-190
               

               Cow position:
               chr21:41050967-41051071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               86-201
               

               Cow position:
               chr21:27409654-27409540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 69
               

               Conread position:
               86-209
               

               Cow position:
               chr21:21479223-21479102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               86-213
               

               Cow position:
               chr21:37361164-37361037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               24, 113
               

               Conread position:
               87-207
               

               Cow position:
               chr21:30970014-30970133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               89-300
               

               Cow position:
               chr21:1264505-1264718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               151, 20
               

               Conread position:
               89-301
               

               Cow position:
               chr21:40305024-40305230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 116
               

               Conread position:
               92-304
               

               Cow position:
               chr21:11363751-11363961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               18, 113
               

               Conread position:
               92-304
               

               Cow position:
               chr21:35569280-35569076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               93-313
               

               Cow position:
               chr21:5961862-5962079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               94-198
               

               Cow position:
               chr21:7424928-7424823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               95-207
               

               Cow position:
               chr21:6291833-6291946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               95-311
               

               Cow position:
               chr21:30024584-30024368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               100-312
               

               Cow position:
               chr21:31992920-31993125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               109-309
               

               Cow position:
               chr21:652475-652287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               130, 94
               

               Conread position:
               115-207
               

               Cow position:
               chr21:31258574-31258666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               185-311
               

               Cow position:
               chr21:2927001-2926870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-182
Cow position:	chr21:44861126-44860944 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	131
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	11, 111
Conread position:	1-184
Cow position:	chr21:5898420-5898225 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	142
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	18, 48
Conread position:	1-186
Cow position:	chr21:5970851-5970659 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	134
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	42, 0
Conread position:	1-189
Cow position:	chr21:13395583-13395780 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	143
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	86, 49
Conread position:	1-195
Cow position:	chr21:38720231-38720435 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	163
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	18, 146
Conread position:	1-197
Cow position:	chr21:45473767-45473567 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	148
Alignm E-value:	7e-31
Alignm gaps (pig, cow):	92, 56
Conread position:	1-198
Cow position:	chr21:25344851-25345052 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	140
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	37, 59
Conread position:	1-201
Cow position:	chr21:3585382-3585173 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	158
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	21, 0
Conread position:	1-206
Cow position:	chr21:10978953-10978750 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	148
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	79, 18
Conread position:	1-207
Cow position:	chr21:16604333-16604117 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	151
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	21, 0
Conread position:	1-208
Cow position:	chr21:44214109-44214328 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	160
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	24, 0
Conread position:	1-209
Cow position:	chr21:868946-868722 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	175
Alignm E-value:	4e-37
Alignm gaps (pig, cow):	18, 195
Conread position:	1-215
Cow position:	chr21:44825906-44825677 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	160
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	21, 0
Conread position:	1-223
Cow position:	chr21:22718799-22718567 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	171
Alignm E-value:	6e-30
Alignm gaps (pig, cow):	21, 38
Conread position:	1-231
Cow position:	chr21:26648024-26647793 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	173
Alignm E-value:	9e-34
Alignm gaps (pig, cow):	47, 98
Conread position:	1-232
Cow position:	chr21:10538265-10538028 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	181
Alignm E-value:	5.99994e-41
Alignm gaps (pig, cow):	57, 42
Conread position:	1-234
Cow position:	chr21:27624694-27624926 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	167
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	21, 36
Conread position:	1-237
Cow position:	chr21:47363753-47363508 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	184
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	21, 192
Conread position:	1-259
Cow position:	chr21:734575-734843 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	201
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	16, 94
Conread position:	1-296
Cow position:	chr21:26244905-26245185 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	222
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	85, 37