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Cow genome map

           
Conread name:
           
rcbl_0644.y1
        

               
Conread position:
               
1-168
               

               
Cow position:
               
chr25:15377245-15377421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr25:13294817-13294979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr25:23817921-23817731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr25:10504418-10504225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr25:8961687-8961887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr25:14833745-14833539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr25:17704667-17704868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr25:15714792-15714998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:20023470-20023259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:22178840-22179043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:11315823-11316031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:16921878-16921668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:24203080-24202882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:25716572-25716774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:26700950-26701155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr25:18202012-18201795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr25:20008054-20008265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
21, 197
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr25:6683145-6682924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr25:26089895-26089673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr25:23779402-23779189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 16
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:15254420-15254204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr25:22531198-22531432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr25:26059424-26059634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr25:36762026-36762266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr25:35109343-35109093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
92, 8
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:21951041-21951329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 255
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr25:34169867-34170166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 223
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr25:20020079-20019774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr25:18293679-18293849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr25:5756613-5756790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr25:22241894-22242082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr25:33256278-33256492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr25:35826365-35826071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 202
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr25:38957885-38958086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr25:36120427-36120727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr25:23917768-23918068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chr25:9349355-9349193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chr25:38425287-38425448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr25:6687872-6688047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr25:14720671-14720847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr25:8346077-8345900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr25:24066734-24066556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr25:7799478-7799660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr25:18564415-18564599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr25:30816811-30817002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr25:12840797-12840603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr25:22730754-22730943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 136
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr25:26654835-26655022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr25:20133387-20133198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr25:14513036-14513237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr25:36081802-36081998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr25:433124-432925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr25:1763015-1763210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr25:10218122-10217926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr25:13325504-13325703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr25:35052696-35052499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr25:5920009-5920205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr25:7216755-7216949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr25:12305201-12305404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr25:28188021-28187817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr25:26087446-26087652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr25:20069649-20069852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr25:9002601-9002805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr25:12806969-12807174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr25:13443488-13443276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr25:23504972-23505186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 198
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr25:27801212-27801410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr25:36872287-36872501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr25:22751084-22750863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
11, 184
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr25:12252887-12252645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr25:20447496-20447753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr25:26051826-26052130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 180
               

               
Conread position:
               
5-307
               

               
Cow position:
               
chr25:18905811-18906116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 192
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr25:22297093-22296810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr25:7023091-7023389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr25:61585-61765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
6-201
               

               
Cow position:
               
chr25:13272493-13272696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 192
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr25:9269274-9269474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr25:11585444-11585657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr25:13621432-13621204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr25:14196787-14197019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
46, 154
               

               
Conread position:
               
8-309
               

               
Cow position:
               
chr25:22341454-22341762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 133
               

               
Conread position:
               
13-201
               

               
Cow position:
               
chr25:11956735-11956933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
14-307
               

               
Cow position:
               
chr25:22261368-22261084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
15-198
               

               
Cow position:
               
chr25:21893271-21893464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
15-201
               

               
Cow position:
               
chr25:23245067-23244875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr25:19478609-19478894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
17-198
               

               
Cow position:
               
chr25:16064827-16065017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
19-186
               

               
Cow position:
               
chr25:10643370-10643197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 168
               

               
Conread position:
               
20-160
               

               
Cow position:
               
chr25:37594344-37594493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
20-186
               

               
Cow position:
               
chr25:17119685-17119855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
20-190
               

               
Cow position:
               
chr25:15440836-15440665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
20-196
               

               
Cow position:
               
chr25:1838178-1838363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
20-197
               

               
Cow position:
               
chr25:26225085-26224905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
20-198
               

               
Cow position:
               
chr25:13569230-13569051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
20-201
               

               
Cow position:
               
chr25:2499210-2499394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 176
               

               
Conread position:
               
20-208
               

               
Cow position:
               
chr25:1824157-1823961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
20-209
               

               
Cow position:
               
chr25:33978275-33978088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
20-209
               

               
Cow position:
               
chr25:36555749-36555552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr25:17658548-17658750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr25:30619004-30619202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
20-299
               

               
Cow position:
               
chr25:17144364-17144645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
20-303
               

               
Cow position:
               
chr25:13672334-13672633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 255
               

               
Conread position:
               
20-310
               

               
Cow position:
               
chr25:21894946-21894628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
21-201
               

               
Cow position:
               
chr25:7581483-7581296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
21-201
               

               
Cow position:
               
chr25:17474572-17474385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
21-240
               

               
Cow position:
               
chr25:34242156-34241936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
21-292
               

               
Cow position:
               
chr25:13384395-13384671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
21-311
               

               
Cow position:
               
chr25:38421607-38421910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
22-188
               

               
Cow position:
               
chr25:18542007-18541831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
22-304
               

               
Cow position:
               
chr25:36019726-36019442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
23-207
               

               
Cow position:
               
chr25:21501109-21500910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
23-209
               

               
Cow position:
               
chr25:16867183-16867376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
24-196
               

               
Cow position:
               
chr25:33555552-33555728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
25-214
               

               
Cow position:
               
chr25:18156341-18156149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
26-205
               

               
Cow position:
               
chr25:7726611-7726794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
26-300
               

               
Cow position:
               
chr25:36017482-36017769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
28-204
               

               
Cow position:
               
chr25:17403432-17403610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
32-196
               

               
Cow position:
               
chr25:18760755-18760585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
34-189
               

               
Cow position:
               
chr25:30656685-30656533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr25:18288808-18288641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
36-196
               

               
Cow position:
               
chr25:5474271-5474107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr25:26072596-26072434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr25:31230277-31230120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
37-209
               

               
Cow position:
               
chr25:7673253-7673437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
37-210
               

               
Cow position:
               
chr25:22348502-22348326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
38-186
               

               
Cow position:
               
chr25:40321328-40321176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
38-188
               

               
Cow position:
               
chr25:33457693-33457847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
38-195
               

               
Cow position:
               
chr25:36840357-36840517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
38-204
               

               
Cow position:
               
chr25:1840285-1840455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
38-209
               

               
Cow position:
               
chr25:9939295-9939127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
38-214
               

               
Cow position:
               
chr25:28597650-28597469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
39-201
               

               
Cow position:
               
chr25:18929230-18929064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
40-209
               

               
Cow position:
               
chr25:31762645-31762471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
41-207
               

               
Cow position:
               
chr25:33311364-33311192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
41-310
               

               
Cow position:
               
chr25:28666409-28666673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr25:20862426-20862609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
45-201
               

               
Cow position:
               
chr25:6474118-6473959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
46-186
               

               
Cow position:
               
chr25:35090605-35090456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 109
               

               
Conread position:
               
46-219
               

               
Cow position:
               
chr25:20461077-20461247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
46-304
               

               
Cow position:
               
chr25:26160935-26161199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
47-172
               

               
Cow position:
               
chr25:10364364-10364238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
47-207
               

               
Cow position:
               
chr25:17918943-17919109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
47-208
               

               
Cow position:
               
chr25:9843147-9843311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
49-207
               

               
Cow position:
               
chr25:31514153-31514315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
50-205
               

               
Cow position:
               
chr25:9615810-9615969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
50-208
               

               
Cow position:
               
chr25:40931251-40931408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
51-176
               

               
Cow position:
               
chr25:4221629-4221500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
51-213
               

               
Cow position:
               
chr25:4009067-4009233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
56-200
               

               
Cow position:
               
chr25:33101626-33101478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
57-188
               

               
Cow position:
               
chr25:21266971-21267102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
57-198
               

               
Cow position:
               
chr25:7277338-7277201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
57-235
               

               
Cow position:
               
chr25:10359606-10359801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 170
               

               
Conread position:
               
57-306
               

               
Cow position:
               
chr25:22520317-22520558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 146
               

               
Conread position:
               
57-312
               

               
Cow position:
               
chr25:15218116-15218363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
57-316
               

               
Cow position:
               
chr25:13503413-13503662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
59-189
               

               
Cow position:
               
chr25:10791832-10791699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
61-201
               

               
Cow position:
               
chr25:7380855-7380712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 123
               

               
Conread position:
               
62-206
               

               
Cow position:
               
chr25:3744760-3744613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
62-208
               

               
Cow position:
               
chr25:40904845-40904695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
64-201
               

               
Cow position:
               
chr25:36873069-36872928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
66-207
               

               
Cow position:
               
chr25:5807934-5808079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-237
               

               
Cow position:
               
chr25:13551075-13550895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
70-192
               

               
Cow position:
               
chr25:23998931-23998805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
72-196
               

               
Cow position:
               
chr25:14164195-14164318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
72-237
               

               
Cow position:
               
chr25:14224598-14224433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
75-204
               

               
Cow position:
               
chr25:32745338-32745469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
78-198
               

               
Cow position:
               
chr25:18646588-18646710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
79-207
               

               
Cow position:
               
chr25:36369823-36369952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
79-207
               

               
Cow position:
               
chr25:36375514-36375643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
79-215
               

               
Cow position:
               
chr25:10138322-10138459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
82-201
               

               
Cow position:
               
chr25:18491045-18491166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
82-207
               

               
Cow position:
               
chr25:7311388-7311262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
82-214
               

               
Cow position:
               
chr25:23323497-23323629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 111
               

               
Conread position:
               
82-223
               

               
Cow position:
               
chr25:23016027-23016171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
83-321
               

               
Cow position:
               
chr25:13805022-13805242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
84-196
               

               
Cow position:
               
chr25:7330612-7330727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
86-207
               

               
Cow position:
               
chr25:5791705-5791582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
86-222
               

               
Cow position:
               
chr25:11272387-11272521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
87-207
               

               
Cow position:
               
chr25:18551321-18551202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
87-216
               

               
Cow position:
               
chr25:7403328-7403200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr25:7061242-7061038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
89-304
               

               
Cow position:
               
chr25:9642516-9642733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 189
               

               
Conread position:
               
92-300
               

               
Cow position:
               
chr25:36136122-36135921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
92-305
               

               
Cow position:
               
chr25:21284894-21285099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
92-311
               

               
Cow position:
               
chr25:27520740-27520540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
93-204
               

               
Cow position:
               
chr25:33100594-33100706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
93-333
               

               
Cow position:
               
chr25:35624858-35624631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
230, 11
               

               
Conread position:
               
100-201
               

               
Cow position:
               
chr25:11855523-11855422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
104-311
               

               
Cow position:
               
chr25:25828739-25828947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
109-213
               

               
Cow position:
               
chr25:31344059-31343956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
109-214
               

               
Cow position:
               
chr25:8410998-8410893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr25:12899763-12899967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
109-310
               

               
Cow position:
               
chr25:12509797-12509606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
113-292
               

               
Cow position:
               
chr25:17775037-17775216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
121, 126
               

               
Conread position:
               
157-308
               

               
Cow position:
               
chr25:11841356-11841500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 5
               

               
Conread position:
               
187-310
               

               
Cow position:
               
chr25:28186365-28186247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
192-310
               

               
Cow position:
               
chr25:13653983-13654099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               
Show alignments to all cow chromosomes.