Cow genome map

Conread name: rcbl_0644.y1

Conread position: 1-165
Cow position: chr9:49709951-49709782 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 115

Conread position: 1-188
Cow position: chr9:13846029-13846215 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 38

Conread position: 1-188
Cow position: chr9:19714188-19713992 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 1-188
Cow position: chr9:40542232-40542048 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 48

Conread position: 1-189
Cow position: chr9:51566381-51566584 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 1-189
Cow position: chr9:51720795-51720986 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 21, 53

Conread position: 1-189
Cow position: chr9:56032213-56032405 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 78, 56

Conread position: 1-190
Cow position: chr9:34468470-34468668 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 187

Conread position: 1-192
Cow position: chr9:5756889-5757083 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 32

Conread position: 1-192
Cow position: chr9:62459474-62459275 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 34

Conread position: 1-195
Cow position: chr9:22318458-22318257 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 21, 158

Conread position: 1-195
Cow position: chr9:42478375-42478577 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 1-195
Cow position: chr9:55287784-55287985 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 1-196
Cow position: chr9:60110355-60110154 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 24

Conread position: 1-197
Cow position: chr9:8534583-8534793 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 42

Conread position: 1-197
Cow position: chr9:20579492-20579692 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 80

Conread position: 1-201
Cow position: chr9:6189264-6189466 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 39

Conread position: 1-201
Cow position: chr9:28726613-28726831 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-201
Cow position: chr9:30124028-30123828 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 91

Conread position: 1-201
Cow position: chr9:50139392-50139184 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 1-201
Cow position: chr9:64064247-64064464 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 1-202
Cow position: chr9:29339217-29339416 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 34

Conread position: 1-207
Cow position: chr9:34374822-34375031 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 60

Conread position: 1-207
Cow position: chr9:36410250-36410454 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 107

Conread position: 1-207
Cow position: chr9:38624519-38624731 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 1-207
Cow position: chr9:50310666-50310867 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 87, 44

Conread position: 1-207
Cow position: chr9:50977134-50977360 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 32

Conread position: 1-209
Cow position: chr9:26086169-26085949 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 102

Conread position: 1-212
Cow position: chr9:39011363-39011581 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 14

Conread position: 1-214
Cow position: chr9:47590871-47591093 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 200

Conread position: 1-214
Cow position: chr9:55118193-55117977 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 99

Conread position: 1-223
Cow position: chr9:54528619-54528388 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 44

Conread position: 1-226
Cow position: chr9:11303968-11304199 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 18, 112

Conread position: 1-268
Cow position: chr9:5509835-5509562 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 18, 40

Conread position: 1-301
Cow position: chr9:35105676-35106000 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 281

Conread position: 1-303
Cow position: chr9:62668359-62668048 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 177

Conread position: 1-304
Cow position: chr9:63194712-63194413 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 208

Conread position: 1-311
Cow position: chr9:64050453-64050781 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 2-184
Cow position: chr9:62656910-62656719 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 67

Conread position: 2-196
Cow position: chr9:5594606-5594406 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 2-201
Cow position: chr9:56065663-56065464 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 96

Conread position: 2-248
Cow position: chr9:56011605-56011354 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 186

Conread position: 3-198
Cow position: chr9:56453440-56453242 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 167

Conread position: 3-201
Cow position: chr9:37017001-37016797 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 99

Conread position: 3-219
Cow position: chr9:43443905-43443683 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 3-294
Cow position: chr9:54716501-54716777 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 95

Conread position: 3-311
Cow position: chr9:59386662-59386988 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 290

Conread position: 4-308
Cow position: chr9:52001107-52000822 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 37

Conread position: 4-310
Cow position: chr9:1973044-1972717 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 49, 107

Conread position: 5-166
Cow position: chr9:1950021-1949851 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 5-172
Cow position: chr9:20091149-20090974 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 5-173
Cow position: chr9:49417088-49416914 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 45

Conread position: 5-174
Cow position: chr9:41679847-41679673 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 37

Conread position: 5-175
Cow position: chr9:19493361-19493541 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 5-176
Cow position: chr9:6879874-6879703 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 38

Conread position: 5-176
Cow position: chr9:60027303-60027121 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 63

Conread position: 5-179
Cow position: chr9:15225197-15225375 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 53

Conread position: 5-179
Cow position: chr9:23955882-23956059 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 57

Conread position: 5-183
Cow position: chr9:5433739-5433549 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 5-184
Cow position: chr9:55321743-55321553 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 12

Conread position: 5-187
Cow position: chr9:9753292-9753477 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 32

Conread position: 5-187
Cow position: chr9:10819731-10819915 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 37

Conread position: 5-187
Cow position: chr9:55075032-55075215 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 54

Conread position: 5-188
Cow position: chr9:12281075-12280882 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 5-188
Cow position: chr9:14796676-14796858 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 10

Conread position: 5-188
Cow position: chr9:61303105-61302912 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 5-189
Cow position: chr9:29185031-29185226 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 5-189
Cow position: chr9:63745912-63745726 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 54, 102

Conread position: 5-192
Cow position: chr9:32732587-32732771 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 80

Conread position: 5-193
Cow position: chr9:5245963-5245760 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 5-193
Cow position: chr9:41394547-41394740 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 59

Conread position: 5-195
Cow position: chr9:6840103-6839899 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 190

Conread position: 5-195
Cow position: chr9:9552194-9551996 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 178

Conread position: 5-195
Cow position: chr9:10650200-10650394 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 37

Conread position: 5-196
Cow position: chr9:5327357-5327162 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 22

Conread position: 5-196
Cow position: chr9:22443526-22443722 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 181

Conread position: 5-196
Cow position: chr9:45141500-45141696 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 5-197
Cow position: chr9:26279070-26279266 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 58, 32

Conread position: 5-197
Cow position: chr9:40215343-40215149 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 107

Conread position: 5-197
Cow position: chr9:52598622-52598818 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 38

Conread position: 5-198
Cow position: chr9:9311962-9311760 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 12

Conread position: 5-198
Cow position: chr9:11168831-11168633 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 180

Conread position: 5-198
Cow position: chr9:34286904-34286701 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 5-198
Cow position: chr9:38645241-38645442 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 73

Conread position: 5-198
Cow position: chr9:41283115-41282917 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 38

Conread position: 5-198
Cow position: chr9:51620539-51620348 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 49

Conread position: 5-201
Cow position: chr9:1751439-1751236 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 38

Conread position: 5-201
Cow position: chr9:26057340-26057532 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 67

Conread position: 5-201
Cow position: chr9:28747421-28747620 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 58

Conread position: 5-201
Cow position: chr9:31359702-31359503 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 32

Conread position: 5-201
Cow position: chr9:34902007-34902201 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 84

Conread position: 5-201
Cow position: chr9:35547373-35547167 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 5-201
Cow position: chr9:64559783-64559983 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 5-204
Cow position: chr9:3186229-3186022 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 5-204
Cow position: chr9:8998458-8998245 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 5-206
Cow position: chr9:33411475-33411677 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 41

Conread position: 5-207
Cow position: chr9:9723782-9723983 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 33

Conread position: 5-207
Cow position: chr9:10010903-10010708 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 88, 46

Conread position: 5-207
Cow position: chr9:27279410-27279202 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 32

Conread position: 5-207
Cow position: chr9:52511216-52511011 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 33

Conread position: 5-207
Cow position: chr9:52754755-52754956 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 33

Conread position: 5-207
Cow position: chr9:53139031-53139239 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 33

Conread position: 5-208
Cow position: chr9:6397680-6397891 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 191

Conread position: 5-208
Cow position: chr9:11123381-11123591 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 129

Conread position: 5-208
Cow position: chr9:18827953-18828160 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 32

Conread position: 5-209
Cow position: chr9:12225876-12226089 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 153

Conread position: 5-209
Cow position: chr9:33598082-33597877 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 45

Conread position: 5-209
Cow position: chr9:38941330-38941541 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 5-212
Cow position: chr9:33114448-33114234 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 27

Conread position: 5-213
Cow position: chr9:21888268-21888058 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 45

Conread position: 5-213
Cow position: chr9:38846242-38846445 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 37

Conread position: 5-214
Cow position: chr9:9443502-9443716 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 58, 38

Conread position: 5-215
Cow position: chr9:40005577-40005364 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 180

Conread position: 5-215
Cow position: chr9:55889912-55889700 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 59, 38

Conread position: 5-220
Cow position: chr9:23265095-23264874 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 119

Conread position: 5-223
Cow position: chr9:11313410-11313639 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 5-223
Cow position: chr9:32981970-32982198 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 30

Conread position: 5-223
Cow position: chr9:50543321-50543546 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 43, 177

Conread position: 5-237
Cow position: chr9:17310461-17310696 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 47, 112

Conread position: 5-237
Cow position: chr9:17411090-17411330 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 5-237
Cow position: chr9:28379071-28378831 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 48

Conread position: 5-239
Cow position: chr9:33697131-33696892 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 134

Conread position: 5-253
Cow position: chr9:32676781-32676530 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 40

Conread position: 5-259
Cow position: chr9:55532916-55532653 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 12

Conread position: 5-268
Cow position: chr9:1520636-1520898 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 171

Conread position: 5-289
Cow position: chr9:3774262-3773956 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 41, 109

Conread position: 5-304
Cow position: chr9:22696322-22696004 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 58, 21

Conread position: 5-304
Cow position: chr9:55084196-55084504 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 135

Conread position: 5-307
Cow position: chr9:5763530-5763831 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 165

Conread position: 5-308
Cow position: chr9:4267882-4268177 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 22

Conread position: 5-309
Cow position: chr9:46664923-46664619 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 38

Conread position: 5-310
Cow position: chr9:7363126-7362827 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 91

Conread position: 5-311
Cow position: chr9:44467251-44467547 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 12

Conread position: 5-315
Cow position: chr9:52839785-52840080 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 38

Conread position: 6-187
Cow position: chr9:29684248-29684058 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 178

Conread position: 6-188
Cow position: chr9:9460076-9459896 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 32

Conread position: 6-188
Cow position: chr9:43871079-43870887 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 6-201
Cow position: chr9:24887300-24887103 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 39

Conread position: 6-202
Cow position: chr9:1867552-1867352 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 77

Conread position: 6-206
Cow position: chr9:6933973-6934179 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 7-189
Cow position: chr9:8338128-8337938 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 7-189
Cow position: chr9:45756466-45756275 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 181

Conread position: 7-189
Cow position: chr9:54681606-54681422 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 167

Conread position: 7-207
Cow position: chr9:18426016-18425805 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 16

Conread position: 7-209
Cow position: chr9:42445880-42446091 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 183

Conread position: 7-230
Cow position: chr9:50080947-50081170 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 86, 37

Conread position: 12-204
Cow position: chr9:13670733-13670529 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 13-184
Cow position: chr9:4580312-4580488 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 34

Conread position: 13-189
Cow position: chr9:3343842-3343660 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 13-201
Cow position: chr9:5649880-5650073 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 13

Conread position: 13-204
Cow position: chr9:40507507-40507701 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 15

Conread position: 13-206
Cow position: chr9:9686319-9686518 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 54

Conread position: 13-209
Cow position: chr9:21460057-21460258 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 105

Conread position: 13-217
Cow position: chr9:35167269-35167061 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 184

Conread position: 13-301
Cow position: chr9:52513355-52513633 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 16

Conread position: 15-187
Cow position: chr9:19903172-19902995 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 15-198
Cow position: chr9:23797330-23797139 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 181

Conread position: 15-200
Cow position: chr9:29819807-29819619 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 64, 138

Conread position: 15-201
Cow position: chr9:37199215-37199027 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 49

Conread position: 15-304
Cow position: chr9:17518397-17518693 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 235

Conread position: 15-309
Cow position: chr9:1938224-1937928 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 23

Conread position: 17-186
Cow position: chr9:31771989-31772164 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 22

Conread position: 17-189
Cow position: chr9:34284041-34283865 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 151
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 42, 13

Conread position: 17-192
Cow position: chr9:6851979-6852159 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 93

Conread position: 17-207
Cow position: chr9:16811570-16811761 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 26

Conread position: 17-207
Cow position: chr9:22638194-22637995 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 17-207
Cow position: chr9:29840974-29840799 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 17-319
Cow position: chr9:18217010-18217310 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 180

Conread position: 17-319
Cow position: chr9:31638552-31638889 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 36, 26

Conread position: 19-198
Cow position: chr9:22408834-22408658 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 24

Conread position: 19-201
Cow position: chr9:35832528-35832719 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 165

Conread position: 20-150
Cow position: chr9:35375514-35375376 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 111

Conread position: 20-169
Cow position: chr9:40776884-40776729 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 20-179
Cow position: chr9:38289238-38289402 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 89

Conread position: 20-184
Cow position: chr9:44709911-44709745 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 30

Conread position: 20-185
Cow position: chr9:9358899-9358725 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 20-185
Cow position: chr9:26403871-26403700 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 20-188
Cow position: chr9:8834043-8834215 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 28, 75

Conread position: 20-188
Cow position: chr9:23788524-23788351 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 33

Conread position: 20-188
Cow position: chr9:26434970-26435145 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 16

Conread position: 20-189
Cow position: chr9:25400110-25400286 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 106

Conread position: 20-192
Cow position: chr9:25921914-25921731 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 107

Conread position: 20-196
Cow position: chr9:9503166-9502993 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 23

Conread position: 20-196
Cow position: chr9:28354607-28354421 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 153
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 20-197
Cow position: chr9:1877921-1878101 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 23

Conread position: 20-197
Cow position: chr9:8723883-8723695 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 20-198
Cow position: chr9:4630191-4630006 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 20-198
Cow position: chr9:23632573-23632750 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 58

Conread position: 20-198
Cow position: chr9:63784838-63785013 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 12

Conread position: 20-201
Cow position: chr9:3353436-3353261 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 7

Conread position: 20-201
Cow position: chr9:5342165-5342348 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 59, 33

Conread position: 20-201
Cow position: chr9:5469949-5469770 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 33

Conread position: 20-201
Cow position: chr9:15215599-15215788 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 20-201
Cow position: chr9:20755669-20755857 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 113

Conread position: 20-201
Cow position: chr9:21383866-21384053 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 179

Conread position: 20-201
Cow position: chr9:43342416-43342230 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 8

Conread position: 20-201
Cow position: chr9:44396745-44396563 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 18

Conread position: 20-201
Cow position: chr9:58662325-58662145 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 23

Conread position: 20-204
Cow position: chr9:9199694-9199883 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 93

Conread position: 20-204
Cow position: chr9:34410309-34410500 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 17

Conread position: 20-204
Cow position: chr9:46981144-46981331 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 17

Conread position: 20-206
Cow position: chr9:35028080-35028270 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 18

Conread position: 20-207
Cow position: chr9:5110946-5110752 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 29, 6

Conread position: 20-207
Cow position: chr9:15805834-15806030 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 18

Conread position: 20-207
Cow position: chr9:32669861-32670054 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 20-208
Cow position: chr9:26102810-26102627 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 76

Conread position: 20-209
Cow position: chr9:10308922-10309107 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 21

Conread position: 20-209
Cow position: chr9:54677334-54677155 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 23

Conread position: 20-214
Cow position: chr9:52407253-52407055 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 148

Conread position: 20-223
Cow position: chr9:9461569-9461777 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 64

Conread position: 20-230
Cow position: chr9:26310595-26310372 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 20-299
Cow position: chr9:8288704-8288421 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 113

Conread position: 20-307
Cow position: chr9:39681426-39681128 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 21-187
Cow position: chr9:63153732-63153901 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 17

Conread position: 21-201
Cow position: chr9:4646243-4646426 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 22

Conread position: 21-201
Cow position: chr9:41781740-41781555 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 22

Conread position: 21-207
Cow position: chr9:9815501-9815306 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 21-207
Cow position: chr9:33542142-33541948 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 16

Conread position: 22-246
Cow position: chr9:58425807-58426028 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 35

Conread position: 23-200
Cow position: chr9:7805879-7806061 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 23-208
Cow position: chr9:16217057-16216867 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 14

Conread position: 24-189
Cow position: chr9:5163901-5164074 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 97

Conread position: 24-201
Cow position: chr9:6954164-6954351 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 13

Conread position: 24-207
Cow position: chr9:8901141-8901333 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 160

Conread position: 24-226
Cow position: chr9:48587361-48587562 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 28

Conread position: 25-304
Cow position: chr9:8976339-8976606 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 18

Conread position: 26-170
Cow position: chr9:39577813-39577669 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 68

Conread position: 26-195
Cow position: chr9:41785292-41785117 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 139

Conread position: 26-207
Cow position: chr9:26477296-26477108 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 26-207
Cow position: chr9:42062184-42061991 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 27-201
Cow position: chr9:22152003-22152186 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 27-311
Cow position: chr9:28686468-28686176 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 29-198
Cow position: chr9:25583908-25583731 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 30-198
Cow position: chr9:32955608-32955782 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 147

Conread position: 30-204
Cow position: chr9:5666142-5665964 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 156

Conread position: 34-204
Cow position: chr9:8992110-8992286 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 23

Conread position: 35-186
Cow position: chr9:58368927-58369082 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 35-207
Cow position: chr9:1729606-1729781 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 22

Conread position: 36-201
Cow position: chr9:17740876-17741043 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 26

Conread position: 36-304
Cow position: chr9:19067849-19067599 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 57, 26

Conread position: 38-208
Cow position: chr9:13743859-13744037 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 151

Conread position: 38-209
Cow position: chr9:52267693-52267864 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 26

Conread position: 38-215
Cow position: chr9:24652469-24652289 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 19

Conread position: 39-319
Cow position: chr9:8562885-8562618 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 76

Conread position: 40-174
Cow position: chr9:48017044-48016906 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 17

Conread position: 40-198
Cow position: chr9:52258003-52258160 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 71

Conread position: 40-209
Cow position: chr9:47214480-47214653 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 12, 145

Conread position: 40-244
Cow position: chr9:39758583-39758376 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 156

Conread position: 41-211
Cow position: chr9:56827544-56827364 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 41-213
Cow position: chr9:39315913-39315740 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 113

Conread position: 41-245
Cow position: chr9:26859412-26859209 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 53

Conread position: 41-312
Cow position: chr9:3738162-3738442 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 52, 21

Conread position: 42-189
Cow position: chr9:64155788-64155940 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 43-188
Cow position: chr9:64629301-64629450 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 129

Conread position: 43-202
Cow position: chr9:22433868-22434030 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 44-223
Cow position: chr9:37069498-37069687 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 9

Conread position: 45-205
Cow position: chr9:52763702-52763864 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 17

Conread position: 46-172
Cow position: chr9:44915040-44915169 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 20

Conread position: 46-196
Cow position: chr9:33347433-33347586 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 18

Conread position: 46-204
Cow position: chr9:55529852-55529696 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 11

Conread position: 46-216
Cow position: chr9:15389167-15389339 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 9

Conread position: 47-216
Cow position: chr9:55494929-55495103 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 48-209
Cow position: chr9:16300512-16300675 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 136

Conread position: 50-198
Cow position: chr9:35793728-35793579 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 13

Conread position: 50-207
Cow position: chr9:31347003-31346845 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 144

Conread position: 50-313
Cow position: chr9:34014195-34014444 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 144

Conread position: 51-304
Cow position: chr9:16137290-16137548 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 11

Conread position: 51-309
Cow position: chr9:5072785-5073034 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 42, 95

Conread position: 52-209
Cow position: chr9:27345532-27345693 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 122

Conread position: 56-213
Cow position: chr9:32858584-32858746 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 110

Conread position: 57-184
Cow position: chr9:7409813-7409679 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 57-187
Cow position: chr9:31098837-31098972 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 129

Conread position: 57-187
Cow position: chr9:44584640-44584507 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 127

Conread position: 57-194
Cow position: chr9:44822277-44822418 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 57-197
Cow position: chr9:9243586-9243454 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 57-201
Cow position: chr9:36458048-36457898 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 57-201
Cow position: chr9:41964688-41964835 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 81

Conread position: 57-202
Cow position: chr9:23970849-23970997 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 139

Conread position: 57-204
Cow position: chr9:39149126-39148975 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 57-207
Cow position: chr9:34484642-34484486 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 57-207
Cow position: chr9:41644703-41644857 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 57-209
Cow position: chr9:12786426-12786580 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 138

Conread position: 57-213
Cow position: chr9:32348767-32348928 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 57-236
Cow position: chr9:10877848-10878024 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 93

Conread position: 57-237
Cow position: chr9:25628131-25627943 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 12

Conread position: 57-268
Cow position: chr9:31814338-31814547 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 22, 138

Conread position: 57-300
Cow position: chr9:34888251-34888503 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 52

Conread position: 57-308
Cow position: chr9:36445667-36445395 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 144

Conread position: 58-262
Cow position: chr9:36850043-36849848 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 31

Conread position: 58-304
Cow position: chr9:24243675-24243931 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 59-222
Cow position: chr9:63134436-63134275 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 34

Conread position: 60-304
Cow position: chr9:36634723-36634965 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 18

Conread position: 61-196
Cow position: chr9:32089432-32089292 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 61-197
Cow position: chr9:21292364-21292505 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 61-201
Cow position: chr9:25375693-25375835 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 70

Conread position: 61-223
Cow position: chr9:54051817-54051653 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 32, 58

Conread position: 61-238
Cow position: chr9:60355169-60355354 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 181

Conread position: 62-201
Cow position: chr9:20637415-20637273 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 78

Conread position: 62-217
Cow position: chr9:14974877-14975037 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 62-318
Cow position: chr9:6293637-6293371 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 62-319
Cow position: chr9:55354653-55354406 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 31, 132

Conread position: 64-311
Cow position: chr9:53413198-53413457 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 65-311
Cow position: chr9:52739868-52740105 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 36

Conread position: 68-201
Cow position: chr9:14738285-14738148 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 68-309
Cow position: chr9:52807369-52807596 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 115

Conread position: 69-311
Cow position: chr9:34065513-34065770 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 71-207
Cow position: chr9:35466489-35466630 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 72-195
Cow position: chr9:3468678-3468552 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 73-215
Cow position: chr9:57116942-57117086 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 75-207
Cow position: chr9:20828929-20828799 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 34

Conread position: 76-201
Cow position: chr9:31344579-31344708 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 76-311
Cow position: chr9:41470072-41470306 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 90

Conread position: 79-195
Cow position: chr9:52648835-52648950 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 102

Conread position: 79-198
Cow position: chr9:2951482-2951606 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 79-200
Cow position: chr9:34917162-34917284 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 103

Conread position: 79-201
Cow position: chr9:34707289-34707412 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 57

Conread position: 79-207
Cow position: chr9:28718735-28718605 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 79-220
Cow position: chr9:26277853-26277709 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 103

Conread position: 79-235
Cow position: chr9:61981542-61981386 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 141

Conread position: 79-239
Cow position: chr9:34135739-34135579 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 8, 90

Conread position: 82-209
Cow position: chr9:1884110-1884239 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 82-223
Cow position: chr9:3847422-3847281 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 111

Conread position: 82-226
Cow position: chr9:5407500-5407642 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 99

Conread position: 84-319
Cow position: chr9:42998528-42998755 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 82, 121

Conread position: 86-196
Cow position: chr9:52998365-52998475 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 49

Conread position: 86-206
Cow position: chr9:35295705-35295584 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 86-207
Cow position: chr9:8645282-8645159 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 86-288
Cow position: chr9:31345515-31345323 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 106

Conread position: 86-309
Cow position: chr9:45455090-45454865 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 168

Conread position: 86-310
Cow position: chr9:1909599-1909829 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 86-318
Cow position: chr9:23403833-23403608 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 24, 106

Conread position: 87-198
Cow position: chr9:22070947-22071059 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 87-207
Cow position: chr9:37955157-37955278 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 88-200
Cow position: chr9:18003179-18003290 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 53

Conread position: 88-214
Cow position: chr9:5156114-5155988 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 118

Conread position: 88-300
Cow position: chr9:8122499-8122282 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 24

Conread position: 88-301
Cow position: chr9:11427672-11427477 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 104

Conread position: 88-304
Cow position: chr9:46190155-46189945 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 103

Conread position: 88-308
Cow position: chr9:33681672-33681467 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 103

Conread position: 88-311
Cow position: chr9:22375188-22374985 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 72

Conread position: 89-197
Cow position: chr9:35932802-35932911 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 89-206
Cow position: chr9:9088615-9088501 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 89-227
Cow position: chr9:14597226-14597364 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 105

Conread position: 92-201
Cow position: chr9:9091096-9091206 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 92-206
Cow position: chr9:34423631-34423515 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 93-286
Cow position: chr9:31270500-31270303 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 187

Conread position: 93-299
Cow position: chr9:41716449-41716229 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 93-311
Cow position: chr9:50540694-50540920 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 42

Conread position: 95-300
Cow position: chr9:64154666-64154883 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 104-244
Cow position: chr9:1878918-1878777 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 5

Conread position: 109-239
Cow position: chr9:29578272-29578142 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 111-201
Cow position: chr9:60741195-60741284 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 111-221
Cow position: chr9:13141527-13141419 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 111-300
Cow position: chr9:20329793-20329976 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 104, 63

Conread position: 111-304
Cow position: chr9:49225393-49225205 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 0

Conread position: 126-318
Cow position: chr9:8023100-8022920 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 132-307
Cow position: chr9:53553434-53553603 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 59

Conread position: 139-308
Cow position: chr9:42986325-42986487 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 52

Conread position: 147-304
Cow position: chr9:2927738-2927578 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 108

Conread position: 192-319
Cow position: chr9:7951740-7951868 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.