Cow genome map
| Conread name: | rche25_a24.y1 |
| Conread position: | 1-119 |
| Cow position: | chr1:29107484-29107365 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-123 |
| Cow position: | chr1:47365274-47365397 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-137 |
| Cow position: | chr1:77942851-77942715 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 1-141 |
| Cow position: | chr1:17635006-17634863 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-143 |
| Cow position: | chr1:30086387-30086247 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 1-187 |
| Cow position: | chr1:83120667-83120854 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 1-205 |
| Cow position: | chr1:638210-638422 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-208 |
| Cow position: | chr1:32964885-32965097 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 184 |
| Conread position: | 1-220 |
| Cow position: | chr1:5655417-5655198 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-221 |
| Cow position: | chr1:39297495-39297713 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 196, 77 |
| Conread position: | 1-221 |
| Cow position: | chr1:75184953-75185174 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-223 |
| Cow position: | chr1:48321580-48321363 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 1-223 |
| Cow position: | chr1:93431153-93431360 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 1-227 |
| Cow position: | chr1:80315094-80315321 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-231 |
| Cow position: | chr1:29099865-29099629 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 203 |
| Conread position: | 2-141 |
| Cow position: | chr1:100140344-100140486 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-223 |
| Cow position: | chr1:78027834-78027610 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 25, 121 |
| Conread position: | 2-229 |
| Cow position: | chr1:55117768-55118002 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 183 |
| Conread position: | 3-223 |
| Cow position: | chr1:89776825-89776604 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 9-223 |
| Cow position: | chr1:98413003-98412789 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 9-224 |
| Cow position: | chr1:101441124-101440910 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 14-176 |
| Cow position: | chr1:64752818-64752982 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 36-223 |
| Cow position: | chr1:33881039-33881230 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 39-230 |
| Cow position: | chr1:87757519-87757326 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 39-230 |
| Cow position: | chr1:88767915-88768107 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 40-223 |
| Cow position: | chr1:91026092-91026280 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 44-223 |
| Cow position: | chr1:35434784-35434967 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 45-215 |
| Cow position: | chr1:76596149-76596323 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 45-225 |
| Cow position: | chr1:23297669-23297850 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 50-223 |
| Cow position: | chr1:11336013-11335836 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 92, 19 |
| Conread position: | 50-223 |
| Cow position: | chr1:32496268-32496443 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 55-224 |
| Cow position: | chr1:22590081-22590253 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 108, 149 |
| Conread position: | 59-231 |
| Cow position: | chr1:55120381-55120213 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 64-223 |
| Cow position: | chr1:15983067-15982909 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 134, 0 |
Show alignments to all cow chromosomes.