Cow genome map
| Conread name: | rche25_a24.y1 |
| Conread position: | 1-110 |
| Cow position: | chr11:32391090-32390981 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-126 |
| Cow position: | chr11:72347033-72347159 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-141 |
| Cow position: | chr11:7050176-7050315 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 1-141 |
| Cow position: | chr11:36258854-36258987 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 1-173 |
| Cow position: | chr11:63678374-63678202 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 1-178 |
| Cow position: | chr11:20423447-20423268 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-204 |
| Cow position: | chr11:11682881-11682671 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 1-205 |
| Cow position: | chr11:6604918-6604710 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 1-215 |
| Cow position: | chr11:8097867-8098084 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 142, 179 |
| Conread position: | 1-216 |
| Cow position: | chr11:18167396-18167607 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 1-222 |
| Cow position: | chr11:51842331-51842547 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 1-223 |
| Cow position: | chr11:881522-881744 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 180 |
| Conread position: | 1-223 |
| Cow position: | chr11:9806438-9806657 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 1-223 |
| Cow position: | chr11:31888433-31888204 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 1-223 |
| Cow position: | chr11:37356218-37356442 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-224 |
| Cow position: | chr11:19703337-19703109 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 1-227 |
| Cow position: | chr11:36901358-36901592 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 1-229 |
| Cow position: | chr11:5144383-5144614 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 1-230 |
| Cow position: | chr11:41483281-41483505 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 2-224 |
| Cow position: | chr11:39234739-39234516 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-225 |
| Cow position: | chr11:85953432-85953221 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 5-215 |
| Cow position: | chr11:4127469-4127259 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 8-140 |
| Cow position: | chr11:42058110-42057976 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 8-221 |
| Cow position: | chr11:37125256-37125471 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 9-223 |
| Cow position: | chr11:37398917-37399127 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 9-223 |
| Cow position: | chr11:39242977-39242762 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 10-225 |
| Cow position: | chr11:37330098-37329881 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 175 |
| Conread position: | 31-223 |
| Cow position: | chr11:5252402-5252598 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 31-224 |
| Cow position: | chr11:5187624-5187428 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 44-217 |
| Cow position: | chr11:67774682-67774510 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 57-223 |
| Cow position: | chr11:39530668-39530501 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 126 |
| Conread position: | 64-229 |
| Cow position: | chr11:66674005-66674161 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 159, 12 |
| Conread position: | 78-224 |
| Cow position: | chr11:63664620-63664474 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.