Cow genome map
| Conread name: | rche25_a24.y1 |
| Conread position: | 1-140 |
| Cow position: | chr17:24997355-24997215 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-206 |
| Cow position: | chr17:891688-891479 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 1-209 |
| Cow position: | chr17:10636398-10636181 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 1-221 |
| Cow position: | chr17:21585624-21585401 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 1-221 |
| Cow position: | chr17:24861660-24861881 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 1-222 |
| Cow position: | chr17:27302337-27302112 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-222 |
| Cow position: | chr17:38189906-38189688 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 1-223 |
| Cow position: | chr17:1730249-1730475 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 202 |
| Conread position: | 1-223 |
| Cow position: | chr17:16359953-16360176 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 1-223 |
| Cow position: | chr17:21591763-21591539 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 1-223 |
| Cow position: | chr17:31562341-31562113 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 1-224 |
| Cow position: | chr17:1756928-1756700 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-227 |
| Cow position: | chr17:1491275-1491505 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 2-224 |
| Cow position: | chr17:25546228-25546001 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 162 |
| Conread position: | 3-165 |
| Cow position: | chr17:20347286-20347126 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 3-222 |
| Cow position: | chr17:21461133-21461354 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 140, 32 |
| Conread position: | 4-223 |
| Cow position: | chr17:15483742-15483523 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 164 |
| Conread position: | 7-223 |
| Cow position: | chr17:11052017-11052241 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 8-224 |
| Cow position: | chr17:16380554-16380333 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 9-223 |
| Cow position: | chr17:11072291-11072506 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 10-128 |
| Cow position: | chr17:25148084-25147965 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 10-224 |
| Cow position: | chr17:4879217-4879434 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 131, 99 |
| Conread position: | 13-222 |
| Cow position: | chr17:17641847-17641634 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 16-223 |
| Cow position: | chr17:1325259-1325466 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-169 |
| Cow position: | chr17:5347951-5347808 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 35-222 |
| Cow position: | chr17:11124388-11124198 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 107, 78 |
| Conread position: | 38-141 |
| Cow position: | chr17:24988793-24988690 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-208 |
| Cow position: | chr17:41950406-41950573 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 39-223 |
| Cow position: | chr17:27761231-27761417 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 39-224 |
| Cow position: | chr17:11244530-11244717 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 49-228 |
| Cow position: | chr17:6763136-6763322 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 93, 59 |
| Conread position: | 223-432 |
| Cow position: | chr17:41889022-41888817 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 174, 100 |
Show alignments to all cow chromosomes.