Cow genome map
| Conread name: | rche25_a24.y1 |
| Conread position: | 1-110 |
| Cow position: | chr21:7074184-7074076 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-131 |
| Cow position: | chr21:7747593-7747723 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 1-131 |
| Cow position: | chr21:41569414-41569285 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 1-140 |
| Cow position: | chr21:12898627-12898766 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-141 |
| Cow position: | chr21:6326666-6326526 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 1-141 |
| Cow position: | chr21:17933833-17933687 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 1-214 |
| Cow position: | chr21:41548111-41547905 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 1-221 |
| Cow position: | chr21:47963475-47963258 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 1-223 |
| Cow position: | chr21:1184771-1184549 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-223 |
| Cow position: | chr21:8851097-8851327 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 1-223 |
| Cow position: | chr21:20186195-20185963 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 1-223 |
| Cow position: | chr21:20786018-20785786 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 1-224 |
| Cow position: | chr21:23639691-23639453 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 2-223 |
| Cow position: | chr21:41532410-41532632 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-222 |
| Cow position: | chr21:24735392-24735162 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-223 |
| Cow position: | chr21:25592836-25592619 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 3-223 |
| Cow position: | chr21:42475251-42475028 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 15-223 |
| Cow position: | chr21:29200619-29200830 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 126, 169 |
| Conread position: | 22-225 |
| Cow position: | chr21:24207623-24207827 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 86 |
| Conread position: | 23-225 |
| Cow position: | chr21:35449699-35449492 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 158 |
| Conread position: | 30-223 |
| Cow position: | chr21:34428408-34428602 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 154, 18 |
| Conread position: | 30-224 |
| Cow position: | chr21:20172582-20172390 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 39-226 |
| Cow position: | chr21:15249896-15250085 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 43-225 |
| Cow position: | chr21:46767163-46766973 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 44-223 |
| Cow position: | chr21:42169460-42169637 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 144, 130 |
| Conread position: | 47-223 |
| Cow position: | chr21:48595941-48595766 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 152, 70 |
| Conread position: | 50-223 |
| Cow position: | chr21:16845179-16845005 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 53-223 |
| Cow position: | chr21:43626654-43626483 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 71-223 |
| Cow position: | chr21:9206933-9206777 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 114 |
Show alignments to all cow chromosomes.