Cow genome map
| Conread name: | rche25_a24.y1 |
| Conread position: | 1-129 |
| Cow position: | chr5:24886927-24887057 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-129 |
| Cow position: | chr5:24893365-24893494 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 1-141 |
| Cow position: | chr5:19004402-19004262 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-145 |
| Cow position: | chr5:12785246-12785101 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 1-198 |
| Cow position: | chr5:43659780-43659586 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 1-200 |
| Cow position: | chr5:68391571-68391771 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 169 |
| Conread position: | 1-206 |
| Cow position: | chr5:22847134-22846928 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 146, 16 |
| Conread position: | 1-221 |
| Cow position: | chr5:8763579-8763799 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 1-221 |
| Cow position: | chr5:47997176-47996955 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 1-223 |
| Cow position: | chr5:27990764-27990542 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 170 |
| Conread position: | 1-223 |
| Cow position: | chr5:46862433-46862210 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-224 |
| Cow position: | chr5:44114487-44114711 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 2-223 |
| Cow position: | chr5:44888197-44888423 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 8-221 |
| Cow position: | chr5:18777964-18777749 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 9-223 |
| Cow position: | chr5:17044188-17043974 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 9-223 |
| Cow position: | chr5:67964563-67964777 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 70 |
| Conread position: | 24-224 |
| Cow position: | chr5:40699274-40699068 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 107, 199 |
| Conread position: | 31-223 |
| Cow position: | chr5:2187178-2186986 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 157, 59 |
| Conread position: | 64-223 |
| Cow position: | chr5:33715348-33715186 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 70 |
| Conread position: | 76-223 |
| Cow position: | chr5:34547606-34547466 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 72 |
Show alignments to all cow chromosomes.