Cow genome map
| Conread name: | rche25_a24.y1 |
| Conread position: | 1-141 |
| Cow position: | chr9:7798562-7798702 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 1-184 |
| Cow position: | chr9:36681734-36681913 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 139, 30 |
| Conread position: | 1-204 |
| Cow position: | chr9:25574555-25574750 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 1-207 |
| Cow position: | chr9:6590063-6590276 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-215 |
| Cow position: | chr9:51279848-51280067 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 1-219 |
| Cow position: | chr9:36426084-36426306 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 1-222 |
| Cow position: | chr9:23518868-23518650 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 135, 34 |
| Conread position: | 1-223 |
| Cow position: | chr9:6134086-6133864 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 1-223 |
| Cow position: | chr9:9733426-9733201 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 1-223 |
| Cow position: | chr9:15223884-15223658 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 1-223 |
| Cow position: | chr9:56294103-56294319 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 129 |
| Conread position: | 1-224 |
| Cow position: | chr9:25794388-25794612 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 1-224 |
| Cow position: | chr9:44609794-44610015 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 26, 6 |
| Conread position: | 1-226 |
| Cow position: | chr9:6126954-6126735 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 1-227 |
| Cow position: | chr9:45406735-45406960 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 149, 104 |
| Conread position: | 1-246 |
| Cow position: | chr9:10290366-10290116 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 69 |
| Conread position: | 3-224 |
| Cow position: | chr9:41954051-41954269 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 4-215 |
| Cow position: | chr9:36396765-36396982 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 7-225 |
| Cow position: | chr9:21499731-21499517 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 9-141 |
| Cow position: | chr9:61851711-61851577 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 9-221 |
| Cow position: | chr9:50822586-50822372 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 15-223 |
| Cow position: | chr9:10160364-10160157 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 11, 136 |
| Conread position: | 30-224 |
| Cow position: | chr9:8847871-8848063 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 37-223 |
| Cow position: | chr9:5478707-5478887 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 39-214 |
| Cow position: | chr9:46090610-46090438 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 5 |
| Conread position: | 44-223 |
| Cow position: | chr9:54107930-54107750 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 96, 25 |
| Conread position: | 48-223 |
| Cow position: | chr9:26528557-26528734 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 8, 130 |
| Conread position: | 63-215 |
| Cow position: | chr9:51276173-51276016 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.