Cow genome map
| Conread name: | rche25_a24.y1 |
| Conread position: | 1-95 |
| Cow position: | chrX:23320505-23320410 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-134 |
| Cow position: | chrX:31910723-31910862 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-139 |
| Cow position: | chrX:34635536-34635675 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-140 |
| Cow position: | chrX:34767803-34767944 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-141 |
| Cow position: | chrX:10062235-10062094 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-143 |
| Cow position: | chrX:6999589-6999446 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 1-193 |
| Cow position: | chrX:25180419-25180225 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 1-220 |
| Cow position: | chrX:16893589-16893369 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 1-221 |
| Cow position: | chrX:832294-832075 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 1-223 |
| Cow position: | chrX:3513281-3513506 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 1-223 |
| Cow position: | chrX:27529595-27529372 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 117 |
| Conread position: | 1-225 |
| Cow position: | chrX:38741125-38740900 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 2-224 |
| Cow position: | chrX:34213818-34213595 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 3-188 |
| Cow position: | chrX:37251473-37251284 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-223 |
| Cow position: | chrX:38129247-38129477 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 132 |
| Conread position: | 3-224 |
| Cow position: | chrX:35981682-35981462 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 24, 128 |
| Conread position: | 7-182 |
| Cow position: | chrX:40315844-40315664 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 166 |
| Conread position: | 7-222 |
| Cow position: | chrX:33159050-33158829 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 7-223 |
| Cow position: | chrX:1742949-1743173 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 7-226 |
| Cow position: | chrX:38674888-38674662 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 205 |
| Conread position: | 7-228 |
| Cow position: | chrX:29815802-29815577 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 9-226 |
| Cow position: | chrX:29145481-29145263 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 15-223 |
| Cow position: | chrX:3450823-3451037 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 37-165 |
| Cow position: | chrX:29539082-29538950 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 44-224 |
| Cow position: | chrX:36874171-36873990 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 53-227 |
| Cow position: | chrX:25179639-25179468 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 61-198 |
| Cow position: | chrX:34830273-34830410 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 77-224 |
| Cow position: | chrX:23323112-23323257 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 78-227 |
| Cow position: | chrX:33008528-33008379 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.