Cow genome map


           Conread name:
           rcki26_b12.y1
        

               Conread position:
               22-298
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 228
               

               Conread position:
               22-364
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 125
               

               Conread position:
               34-307
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               237, 92
               

               Conread position:
               34-329
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               16, 225
               

               Conread position:
               34-355
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               108, 62
               

               Conread position:
               34-364
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               34-367
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               273, 131
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 114
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 215
               

               Conread position:
               34-379
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 56
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               20, 286
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 145
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 87
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 66
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 226
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 221
               

               Conread position:
               34-395
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               118, 107
               

               Conread position:
               34-397
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               157, 129
               

               Conread position:
               35-350
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 144
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               223, 53
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               153, 85
               

               Conread position:
               35-376
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               153, 54
               

               Conread position:
               35-377
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               108, 153
               

               Conread position:
               35-380
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 149
               

               Conread position:
               35-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               41, 118
               

               Conread position:
               35-397
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               152, 105
               

               Conread position:
               35-397
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 213
               

               Conread position:
               39-368
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               229, 105
               

               Conread position:
               40-329
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               218, 139
               

               Conread position:
               40-349
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 15
               

               Conread position:
               40-387
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 94
               

               Conread position:
               41-364
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               66, 97
               

               Conread position:
               43-315
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               100, 206
               

               Conread position:
               44-384
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 137
               

               Conread position:
               54-362
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 65
               

               Conread position:
               55-350
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               203, 142
               

               Conread position:
               55-367
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               130, 247
               

               Conread position:
               63-337
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               85, 99
               

               Conread position:
               80-389
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               108, 152
               

               Conread position:
               84-364
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               96, 35
               

               Conread position:
               85-316
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 91
               

               Conread position:
               99-364
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               89, 151
               

               Conread position:
               105-300
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               82, 54
               

               Conread position:
               113-362
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               72, 87
               

               Conread position:
               125-386
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               126-321
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               132, 26
               

               Conread position:
               128-371
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 121
               

               Conread position:
               136-313
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 113
               

               Conread position:
               141-362
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               141-371
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               141-383
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               142-329
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               142-376
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               144-382
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               114, 39
               

               Conread position:
               147-363
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               147-364
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 95
               

               Conread position:
               147-364
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 102
               

               Conread position:
               148-357
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 38
               

               Conread position:
               148-361
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 101
               

               Conread position:
               148-362
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               148-380
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               44, 103
               

               Conread position:
               148-387
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 101
               

               Conread position:
               148-387
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               156-387
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 93
               

               Conread position:
               159-329
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               159-371
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               159-377
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               159-381
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               187-364
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 61
               
Show alignments to all cow chromosomes.