Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 22-298 |
| Cow position: | chr10:24096791-24096513 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 228 |
| Conread position: | 22-364 |
| Cow position: | chr10:48378043-48377708 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 125 |
| Conread position: | 34-307 |
| Cow position: | chr10:53973454-53973720 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 237, 92 |
| Conread position: | 34-329 |
| Cow position: | chr10:42230257-42230554 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 16, 225 |
| Conread position: | 34-355 |
| Cow position: | chr10:1427642-1427960 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 108, 62 |
| Conread position: | 34-364 |
| Cow position: | chr10:6516585-6516250 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 34-367 |
| Cow position: | chr10:22390198-22390526 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 273, 131 |
| Conread position: | 34-371 |
| Cow position: | chr10:22528299-22527965 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 114 |
| Conread position: | 34-371 |
| Cow position: | chr10:31401297-31400955 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 215 |
| Conread position: | 34-379 |
| Cow position: | chr10:28395682-28395357 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 154, 56 |
| Conread position: | 34-386 |
| Cow position: | chr10:1979072-1978713 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 20, 286 |
| Conread position: | 34-386 |
| Cow position: | chr10:11247580-11247928 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 145 |
| Conread position: | 34-386 |
| Cow position: | chr10:15818191-15817837 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 87 |
| Conread position: | 34-386 |
| Cow position: | chr10:20446706-20447052 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 66 |
| Conread position: | 34-386 |
| Cow position: | chr10:37529679-37529309 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 226 |
| Conread position: | 34-386 |
| Cow position: | chr10:52278322-52278683 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 221 |
| Conread position: | 34-395 |
| Cow position: | chr10:11967246-11966883 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 118, 107 |
| Conread position: | 34-397 |
| Cow position: | chr10:32393623-32393987 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 157, 129 |
| Conread position: | 35-350 |
| Cow position: | chr10:36001808-36002117 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 144 |
| Conread position: | 35-371 |
| Cow position: | chr10:8922883-8923217 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 223, 53 |
| Conread position: | 35-371 |
| Cow position: | chr10:20372513-20372186 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 85 |
| Conread position: | 35-376 |
| Cow position: | chr10:19678473-19678816 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 153, 54 |
| Conread position: | 35-377 |
| Cow position: | chr10:11009025-11009358 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 108, 153 |
| Conread position: | 35-380 |
| Cow position: | chr10:34661717-34661365 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 149 |
| Conread position: | 35-381 |
| Cow position: | chr10:35862627-35862273 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 35-397 |
| Cow position: | chr10:13311337-13311697 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 152, 105 |
| Conread position: | 35-397 |
| Cow position: | chr10:37818957-37818593 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 213 |
| Conread position: | 39-368 |
| Cow position: | chr10:21657031-21657360 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 229, 105 |
| Conread position: | 40-329 |
| Cow position: | chr10:22321134-22321418 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 218, 139 |
| Conread position: | 40-349 |
| Cow position: | chr10:16598297-16598604 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 15 |
| Conread position: | 40-387 |
| Cow position: | chr10:31362599-31362258 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 94 |
| Conread position: | 41-364 |
| Cow position: | chr10:43451308-43450980 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 66, 97 |
| Conread position: | 43-315 |
| Cow position: | chr10:51305936-51306212 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 100, 206 |
| Conread position: | 44-384 |
| Cow position: | chr10:29816199-29816542 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 54-362 |
| Cow position: | chr10:40421222-40420912 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 65 |
| Conread position: | 55-350 |
| Cow position: | chr10:59675630-59675333 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 203, 142 |
| Conread position: | 55-367 |
| Cow position: | chr10:33067963-33067631 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 130, 247 |
| Conread position: | 63-337 |
| Cow position: | chr10:804824-805100 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 85, 99 |
| Conread position: | 80-389 |
| Cow position: | chr10:55733952-55733645 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 108, 152 |
| Conread position: | 84-364 |
| Cow position: | chr10:5543597-5543315 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 85-316 |
| Cow position: | chr10:1749226-1749460 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 99-364 |
| Cow position: | chr10:66127523-66127795 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 105-300 |
| Cow position: | chr10:21413823-21413629 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 82, 54 |
| Conread position: | 113-362 |
| Cow position: | chr10:54848458-54848707 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 72, 87 |
| Conread position: | 125-386 |
| Cow position: | chr10:54504296-54504560 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 126-321 |
| Cow position: | chr10:69998252-69998057 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 26 |
| Conread position: | 128-371 |
| Cow position: | chr10:34607253-34607499 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 121 |
| Conread position: | 136-313 |
| Cow position: | chr10:39123998-39123820 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 113 |
| Conread position: | 141-362 |
| Cow position: | chr10:35857346-35857124 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 57 |
| Conread position: | 141-371 |
| Cow position: | chr10:15292980-15293207 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 141-383 |
| Cow position: | chr10:60032869-60032618 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 142-329 |
| Cow position: | chr10:26608179-26607991 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 142-376 |
| Cow position: | chr10:11212822-11213057 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 144-382 |
| Cow position: | chr10:23056367-23056130 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 147-363 |
| Cow position: | chr10:49169342-49169121 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 147-364 |
| Cow position: | chr10:9798479-9798265 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 147-364 |
| Cow position: | chr10:37287463-37287242 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 148-357 |
| Cow position: | chr10:37235836-37235624 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 148-361 |
| Cow position: | chr10:41941865-41941647 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 148-362 |
| Cow position: | chr10:57457047-57457266 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 148-380 |
| Cow position: | chr10:29069871-29070111 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 148-387 |
| Cow position: | chr10:34554373-34554137 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 101 |
| Conread position: | 148-387 |
| Cow position: | chr10:52296213-52296452 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 156-387 |
| Cow position: | chr10:37512525-37512290 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 159-329 |
| Cow position: | chr10:25475305-25475476 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 159-371 |
| Cow position: | chr10:25045956-25045748 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 159-377 |
| Cow position: | chr10:53935013-53934790 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 159-381 |
| Cow position: | chr10:11080684-11080912 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 187-364 |
| Cow position: | chr10:28176638-28176459 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 61 |
Show alignments to all cow chromosomes.