Cow genome map


           Conread name:
           rcki26_b12.y1
        

               Conread position:
               24-396
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               167, 17
               

               Conread position:
               29-314
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               134, 74
               

               Conread position:
               33-316
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               160, 99
               

               Conread position:
               34-300
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               34-300
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               154, 216
               

               Conread position:
               34-354
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 24
               

               Conread position:
               34-360
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               154, 100
               

               Conread position:
               34-364
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 9
               

               Conread position:
               34-366
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               157, 146
               

               Conread position:
               34-368
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 14
               

               Conread position:
               34-370
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               224, 15
               

               Conread position:
               34-377
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 215
               

               Conread position:
               34-387
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 208
               

               Conread position:
               34-390
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               156, 100
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 215
               

               Conread position:
               35-380
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 131
               

               Conread position:
               35-383
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               156, 215
               

               Conread position:
               35-488
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 99
               

               Conread position:
               40-329
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               40-371
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               148, 107
               

               Conread position:
               40-382
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               88, 69
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               145, 91
               

               Conread position:
               51-386
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 128
               

               Conread position:
               55-387
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 126
               

               Conread position:
               58-383
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 199
               

               Conread position:
               64-300
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               194, 67
               

               Conread position:
               65-300
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               126, 66
               

               Conread position:
               80-371
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 99
               

               Conread position:
               80-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               81-388
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               108, 66
               

               Conread position:
               82-312
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               105, 73
               

               Conread position:
               82-335
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 98
               

               Conread position:
               82-335
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 98
               

               Conread position:
               84-333
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               84-376
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               104, 50
               

               Conread position:
               84-376
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               104, 50
               

               Conread position:
               88-352
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               90-339
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               166, 44
               

               Conread position:
               90-386
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               96-388
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               95, 146
               

               Conread position:
               128-364
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               60, 121
               

               Conread position:
               141-367
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               141-371
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               46, 108
               

               Conread position:
               141-371
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 110
               

               Conread position:
               144-390
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 157
               

               Conread position:
               147-371
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 103
               

               Conread position:
               148-387
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               149-400
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 100
               

               Conread position:
               150-376
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 100
               

               Conread position:
               151-382
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               151-383
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               151-393
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               154-377
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 96
               

               Conread position:
               156-367
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 23
               

               Conread position:
               160-386
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               173-371
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               187-329
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               187-361
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               79, 61
               
Show alignments to all cow chromosomes.