Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 13-364 |
| Cow position: | chr14:46489818-46490174 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 42 |
| Conread position: | 21-376 |
| Cow position: | chr14:41211298-41210929 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 13 |
| Conread position: | 33-316 |
| Cow position: | chr14:13768795-13768510 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 158, 216 |
| Conread position: | 33-337 |
| Cow position: | chr14:36554739-36555043 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 33-397 |
| Cow position: | chr14:12739549-12739184 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 158, 108 |
| Conread position: | 33-397 |
| Cow position: | chr14:28137977-28137611 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 154, 209 |
| Conread position: | 34-329 |
| Cow position: | chr14:29010660-29010364 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 159, 20 |
| Conread position: | 34-330 |
| Cow position: | chr14:41749354-41749633 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 34-337 |
| Cow position: | chr14:20666603-20666909 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 34-353 |
| Cow position: | chr14:35650784-35651108 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 111, 169 |
| Conread position: | 34-371 |
| Cow position: | chr14:25779513-25779176 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 21 |
| Conread position: | 34-380 |
| Cow position: | chr14:24417302-24416956 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 169 |
| Conread position: | 34-382 |
| Cow position: | chr14:20640203-20640559 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 218 |
| Conread position: | 34-382 |
| Cow position: | chr14:21285040-21284691 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 234, 53 |
| Conread position: | 34-417 |
| Cow position: | chr14:2938060-2937682 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 159, 23 |
| Conread position: | 35-298 |
| Cow position: | chr14:38239988-38239731 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 109, 148 |
| Conread position: | 35-307 |
| Cow position: | chr14:31399999-31399718 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 111, 226 |
| Conread position: | 35-336 |
| Cow position: | chr14:43250001-43249697 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 124 |
| Conread position: | 35-337 |
| Cow position: | chr14:27791951-27791642 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 267 |
| Conread position: | 35-363 |
| Cow position: | chr14:33538512-33538836 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 128 |
| Conread position: | 35-364 |
| Cow position: | chr14:50363213-50362881 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 193, 146 |
| Conread position: | 35-368 |
| Cow position: | chr14:46735733-46735386 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 112, 70 |
| Conread position: | 35-371 |
| Cow position: | chr14:28090558-28090897 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 112 |
| Conread position: | 35-377 |
| Cow position: | chr14:27848617-27848274 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 214 |
| Conread position: | 35-380 |
| Cow position: | chr14:14326688-14327039 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 61 |
| Conread position: | 35-387 |
| Cow position: | chr14:39779163-39778815 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 27 |
| Conread position: | 40-371 |
| Cow position: | chr14:28378773-28378439 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 149, 94 |
| Conread position: | 40-417 |
| Cow position: | chr14:44382786-44383169 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 42-333 |
| Cow position: | chr14:47507514-47507219 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 208 |
| Conread position: | 43-382 |
| Cow position: | chr14:26432841-26433172 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 145, 59 |
| Conread position: | 55-300 |
| Cow position: | chr14:24980289-24980044 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 136, 194 |
| Conread position: | 55-381 |
| Cow position: | chr14:42154565-42154895 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 133, 52 |
| Conread position: | 64-332 |
| Cow position: | chr14:3107247-3107515 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 80-299 |
| Cow position: | chr14:11056586-11056369 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 80-335 |
| Cow position: | chr14:42330724-42330468 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 85-387 |
| Cow position: | chr14:5836268-5835970 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 87-359 |
| Cow position: | chr14:47588704-47588427 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 104, 162 |
| Conread position: | 87-368 |
| Cow position: | chr14:7317201-7316909 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 101, 163 |
| Conread position: | 98-361 |
| Cow position: | chr14:11507888-11508156 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 152 |
| Conread position: | 105-333 |
| Cow position: | chr14:7291138-7290919 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 111-381 |
| Cow position: | chr14:18345393-18345662 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 141, 18 |
| Conread position: | 127-371 |
| Cow position: | chr14:43036202-43035963 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 147-350 |
| Cow position: | chr14:36709427-36709220 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 148-382 |
| Cow position: | chr14:41128194-41127962 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 110, 36 |
| Conread position: | 148-383 |
| Cow position: | chr14:33714384-33714610 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 154-381 |
| Cow position: | chr14:11819826-11820056 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 95 |
Show alignments to all cow chromosomes.