Cow genome map

Conread name: rcki26_b12.y1

Conread position: 2-368
Cow position:
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 32-359
Cow position:
Alignm length: 336
Alignm identity: 231
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 161, 147

Conread position: 33-300
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 158, 216

Conread position: 34-300
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 155, 108

Conread position: 34-329
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 152

Conread position: 34-329
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 153, 73

Conread position: 34-333
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 145

Conread position: 34-339
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 71

Conread position: 34-349
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 207

Conread position: 34-361
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 101, 233

Conread position: 34-371
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 157, 100

Conread position: 34-371
Cow position:
Alignm length: 342
Alignm identity: 229
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 154, 95

Conread position: 34-376
Cow position:
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 215

Conread position: 34-377
Cow position:
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 145

Conread position: 34-377
Cow position:
Alignm length: 353
Alignm identity: 242
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 77

Conread position: 34-383
Cow position:
Alignm length: 352
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 41

Conread position: 34-383
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 273, 73

Conread position: 34-386
Cow position:
Alignm length: 360
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 157, 108

Conread position: 35-294
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 223, 69

Conread position: 35-305
Cow position:
Alignm length: 283
Alignm identity: 196
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 37

Conread position: 35-307
Cow position:
Alignm length: 276
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 145, 216

Conread position: 35-362
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 206, 99

Conread position: 35-362
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 206, 95

Conread position: 35-362
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 113

Conread position: 35-370
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 153, 65

Conread position: 35-371
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 120

Conread position: 35-382
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 19

Conread position: 35-382
Cow position:
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 155, 214

Conread position: 36-337
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 190

Conread position: 40-381
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 38

Conread position: 40-383
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 42, 58

Conread position: 44-380
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 144, 76

Conread position: 44-380
Cow position:
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 79

Conread position: 48-382
Cow position:
Alignm length: 347
Alignm identity: 245
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 48, 202

Conread position: 51-337
Cow position:
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 196

Conread position: 51-380
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 137, 90

Conread position: 54-383
Cow position:
Alignm length: 341
Alignm identity: 242
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 6, 77

Conread position: 55-336
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 88, 125

Conread position: 55-361
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 203

Conread position: 80-337
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 47

Conread position: 81-328
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 112, 129

Conread position: 84-361
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 182, 101

Conread position: 87-359
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 106, 77

Conread position: 92-321
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 78

Conread position: 125-363
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 34

Conread position: 129-316
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 123

Conread position: 141-333
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 76

Conread position: 148-362
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 37

Conread position: 148-363
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 69

Conread position: 148-364
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 102

Conread position: 149-371
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 93

Conread position: 151-362
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 28

Conread position: 160-371
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 89

Conread position: 163-371
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 86

Conread position: 173-386
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 76

Conread position: 187-313
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 71, 62

Show alignments to all cow chromosomes.