Cow genome map


           Conread name:
           rcki26_b12.y1
        

               Conread position:
               23-299
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 97
               

               Conread position:
               23-359
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               33-299
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               213, 154
               

               Conread position:
               33-301
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               158, 219
               

               Conread position:
               33-359
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               158, 148
               

               Conread position:
               33-359
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               156, 174
               

               Conread position:
               33-383
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               86, 91
               

               Conread position:
               33-397
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               154, 221
               

               Conread position:
               33-397
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               158, 216
               

               Conread position:
               34-284
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               140, 220
               

               Conread position:
               34-337
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               122, 219
               

               Conread position:
               34-361
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               154, 63
               

               Conread position:
               34-364
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               154, 144
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               108, 46
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 147
               

               Conread position:
               34-376
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               156, 118
               

               Conread position:
               34-382
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               160, 103
               

               Conread position:
               34-382
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               154, 82
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 147
               

               Conread position:
               34-390
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 216
               

               Conread position:
               34-390
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               155, 215
               

               Conread position:
               35-362
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               140, 99
               

               Conread position:
               35-363
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               153, 78
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               155, 107
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               153, 40
               

               Conread position:
               35-380
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               108, 217
               

               Conread position:
               35-383
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 100
               

               Conread position:
               39-364
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 210
               

               Conread position:
               40-307
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               145, 18
               

               Conread position:
               40-317
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 144
               

               Conread position:
               40-329
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               148, 139
               

               Conread position:
               40-381
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               14, 276
               

               Conread position:
               40-386
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 96
               

               Conread position:
               41-335
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               101, 213
               

               Conread position:
               41-351
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               139, 34
               

               Conread position:
               42-300
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               151, 207
               

               Conread position:
               42-330
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               125, 138
               

               Conread position:
               43-362
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 10
               

               Conread position:
               45-406
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               146, 204
               

               Conread position:
               51-364
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               137, 68
               

               Conread position:
               55-364
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               246, 79
               

               Conread position:
               58-375
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               93, 168
               

               Conread position:
               70-343
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 191
               

               Conread position:
               73-364
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 176
               

               Conread position:
               73-373
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               117, 47
               

               Conread position:
               73-383
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               115, 176
               

               Conread position:
               80-368
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               108, 25
               

               Conread position:
               82-308
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               107, 167
               

               Conread position:
               82-364
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 75
               

               Conread position:
               87-364
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 155
               

               Conread position:
               95-398
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               105, 10
               

               Conread position:
               96-371
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               92, 105
               

               Conread position:
               104-364
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               104-386
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               120-371
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               128-306
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 83
               

               Conread position:
               132-371
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               175, 20
               

               Conread position:
               140-371
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               140-386
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               141-364
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               47, 114
               

               Conread position:
               147-371
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               150-378
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               150-381
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 104
               

               Conread position:
               155-394
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 57
               

               Conread position:
               159-382
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               97, 89
               

               Conread position:
               169-380
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               187-363
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 6
               

               Conread position:
               187-386
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               69, 61
               
Show alignments to all cow chromosomes.