Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 23-299 |
| Cow position: | chr16:45173935-45173660 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 23-359 |
| Cow position: | chr16:29051281-29051625 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 33-299 |
| Cow position: | chr16:30018825-30019087 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 213, 154 |
| Conread position: | 33-301 |
| Cow position: | chr16:39033195-39032927 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 158, 219 |
| Conread position: | 33-359 |
| Cow position: | chr16:23532845-23532513 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 158, 148 |
| Conread position: | 33-359 |
| Cow position: | chr16:48520081-48520413 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 156, 174 |
| Conread position: | 33-383 |
| Cow position: | chr16:16265473-16265124 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 86, 91 |
| Conread position: | 33-397 |
| Cow position: | chr16:2724069-2723698 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 154, 221 |
| Conread position: | 33-397 |
| Cow position: | chr16:28467967-28467601 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 158, 216 |
| Conread position: | 34-284 |
| Cow position: | chr16:33458386-33458128 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 140, 220 |
| Conread position: | 34-337 |
| Cow position: | chr16:30638964-30639270 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 122, 219 |
| Conread position: | 34-361 |
| Cow position: | chr16:9973868-9973545 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 154, 63 |
| Conread position: | 34-364 |
| Cow position: | chr16:49125895-49125572 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 154, 144 |
| Conread position: | 34-371 |
| Cow position: | chr16:17142562-17142902 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 108, 46 |
| Conread position: | 34-371 |
| Cow position: | chr16:30143589-30143241 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 147 |
| Conread position: | 34-376 |
| Cow position: | chr16:50189963-50189621 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 156, 118 |
| Conread position: | 34-382 |
| Cow position: | chr16:49169754-49169410 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 160, 103 |
| Conread position: | 34-382 |
| Cow position: | chr16:51500558-51500905 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 154, 82 |
| Conread position: | 34-386 |
| Cow position: | chr16:45139293-45139650 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 147 |
| Conread position: | 34-390 |
| Cow position: | chr16:40561851-40562215 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 216 |
| Conread position: | 34-390 |
| Cow position: | chr16:56231448-56231809 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 155, 215 |
| Conread position: | 35-362 |
| Cow position: | chr16:49230144-49229818 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 140, 99 |
| Conread position: | 35-363 |
| Cow position: | chr16:22804947-22804643 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 153, 78 |
| Conread position: | 35-371 |
| Cow position: | chr16:3633742-3634074 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 155, 107 |
| Conread position: | 35-371 |
| Cow position: | chr16:56913086-56912753 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 153, 40 |
| Conread position: | 35-380 |
| Cow position: | chr16:42218067-42217714 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 108, 217 |
| Conread position: | 35-383 |
| Cow position: | chr16:13307239-13306891 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 100 |
| Conread position: | 39-364 |
| Cow position: | chr16:13698138-13698469 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 210 |
| Conread position: | 40-307 |
| Cow position: | chr16:30909283-30909032 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 145, 18 |
| Conread position: | 40-317 |
| Cow position: | chr16:5293289-5293569 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 11, 144 |
| Conread position: | 40-329 |
| Cow position: | chr16:56853585-56853876 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 148, 139 |
| Conread position: | 40-381 |
| Cow position: | chr16:50418059-50417715 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 276 |
| Conread position: | 40-386 |
| Cow position: | chr16:54578803-54579142 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 96 |
| Conread position: | 41-335 |
| Cow position: | chr16:9948418-9948718 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 101, 213 |
| Conread position: | 41-351 |
| Cow position: | chr16:51578779-51578474 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 139, 34 |
| Conread position: | 42-300 |
| Cow position: | chr16:23248799-23248541 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 151, 207 |
| Conread position: | 42-330 |
| Cow position: | chr16:45233972-45234260 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 125, 138 |
| Conread position: | 43-362 |
| Cow position: | chr16:4103525-4103205 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 45-406 |
| Cow position: | chr16:8651993-8652356 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 146, 204 |
| Conread position: | 51-364 |
| Cow position: | chr16:51113232-51112920 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 137, 68 |
| Conread position: | 55-364 |
| Cow position: | chr16:35757863-35758161 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 246, 79 |
| Conread position: | 58-375 |
| Cow position: | chr16:39514435-39514109 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 93, 168 |
| Conread position: | 70-343 |
| Cow position: | chr16:11790662-11790951 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 191 |
| Conread position: | 73-364 |
| Cow position: | chr16:9932819-9933115 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 30, 176 |
| Conread position: | 73-373 |
| Cow position: | chr16:4293379-4293681 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 117, 47 |
| Conread position: | 73-383 |
| Cow position: | chr16:30715156-30715470 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 115, 176 |
| Conread position: | 80-368 |
| Cow position: | chr16:33645691-33645973 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 108, 25 |
| Conread position: | 82-308 |
| Cow position: | chr16:15762490-15762263 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 107, 167 |
| Conread position: | 82-364 |
| Cow position: | chr16:15808645-15808931 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 87-364 |
| Cow position: | chr16:11621125-11620852 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 155 |
| Conread position: | 95-398 |
| Cow position: | chr16:42253883-42253576 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 105, 10 |
| Conread position: | 96-371 |
| Cow position: | chr16:42242431-42242152 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 92, 105 |
| Conread position: | 104-364 |
| Cow position: | chr16:19003822-19003567 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 104-386 |
| Cow position: | chr16:53627725-53627449 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 120-371 |
| Cow position: | chr16:43506089-43505839 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 128-306 |
| Cow position: | chr16:15320752-15320573 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 132-371 |
| Cow position: | chr16:39417384-39417154 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 175, 20 |
| Conread position: | 140-371 |
| Cow position: | chr16:20025177-20025410 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 140-386 |
| Cow position: | chr16:24672628-24672378 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 141-364 |
| Cow position: | chr16:52889678-52889454 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 47, 114 |
| Conread position: | 147-371 |
| Cow position: | chr16:43308823-43308598 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 150-378 |
| Cow position: | chr16:5256744-5256964 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 150-381 |
| Cow position: | chr16:35623509-35623269 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 155-394 |
| Cow position: | chr16:5363638-5363882 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 159-382 |
| Cow position: | chr16:14568734-14568509 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 169-380 |
| Cow position: | chr16:35168485-35168698 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 187-363 |
| Cow position: | chr16:30705886-30706065 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 6 |
| Conread position: | 187-386 |
| Cow position: | chr16:21904941-21905142 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 61 |
Show alignments to all cow chromosomes.