Cow genome map
Conread name: | rcki26_b12.y1 |
Conread position: | 22-387 |
Cow position: | chr17:32027809-32027434 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 228 |
Conread position: | 32-386 |
Cow position: | chr17:28539708-28540049 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 243 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 148, 8 |
Conread position: | 34-312 |
Cow position: | chr17:29715520-29715245 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 208 |
Conread position: | 34-319 |
Cow position: | chr17:8644703-8644988 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 95 |
Conread position: | 34-337 |
Cow position: | chr17:43717642-43717346 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 138 |
Conread position: | 34-351 |
Cow position: | chr17:7821368-7821047 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 226 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 15, 108 |
Conread position: | 34-351 |
Cow position: | chr17:15103213-15102906 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 218 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 154, 19 |
Conread position: | 34-361 |
Cow position: | chr17:6566145-6566460 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 239 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 154, 78 |
Conread position: | 34-361 |
Cow position: | chr17:19998802-19999133 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 232 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 86, 41 |
Conread position: | 34-362 |
Cow position: | chr17:34317051-34316713 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 223 |
Conread position: | 34-368 |
Cow position: | chr17:1568503-1568171 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 226 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 269, 98 |
Conread position: | 34-381 |
Cow position: | chr17:26764683-26765032 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 102 |
Conread position: | 34-390 |
Cow position: | chr17:12059426-12059072 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 261 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 105, 7 |
Conread position: | 34-390 |
Cow position: | chr17:32365952-32366305 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 134 |
Conread position: | 35-371 |
Cow position: | chr17:9853653-9853991 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 216 |
Conread position: | 35-381 |
Cow position: | chr17:21336030-21335681 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 70 |
Conread position: | 35-387 |
Cow position: | chr17:13144015-13143671 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 111 |
Conread position: | 39-382 |
Cow position: | chr17:1061385-1061044 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 242 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 149, 7 |
Conread position: | 40-355 |
Cow position: | chr17:18592109-18592427 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 224 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 36, 261 |
Conread position: | 41-337 |
Cow position: | chr17:11397343-11397638 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 211 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 147, 124 |
Conread position: | 42-327 |
Cow position: | chr17:21038955-21039235 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 15 |
Conread position: | 44-376 |
Cow position: | chr17:24553681-24554016 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 14 |
Conread position: | 50-361 |
Cow position: | chr17:3306551-3306861 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 73 |
Conread position: | 59-361 |
Cow position: | chr17:30529845-30529547 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 161 |
Conread position: | 64-361 |
Cow position: | chr17:20889071-20889369 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 216 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 123, 115 |
Conread position: | 64-382 |
Cow position: | chr17:25900895-25901212 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 114 |
Conread position: | 79-300 |
Cow position: | chr17:16448045-16448264 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 161 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 106, 73 |
Conread position: | 80-380 |
Cow position: | chr17:3471127-3471434 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 220 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 72, 160 |
Conread position: | 80-380 |
Cow position: | chr17:12216359-12216060 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 224 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 70, 40 |
Conread position: | 83-364 |
Cow position: | chr17:41892340-41892068 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 195 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 120, 65 |
Conread position: | 84-383 |
Cow position: | chr17:18109370-18109068 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 104, 158 |
Conread position: | 89-300 |
Cow position: | chr17:12054441-12054648 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 160, 0 |
Conread position: | 93-329 |
Cow position: | chr17:40312453-40312685 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 170 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 165, 41 |
Conread position: | 104-383 |
Cow position: | chr17:8079053-8079332 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 204 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 83, 101 |
Conread position: | 105-327 |
Cow position: | chr17:25796603-25796379 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 83, 144 |
Conread position: | 107-378 |
Cow position: | chr17:21115206-21114946 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 195 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 81, 27 |
Conread position: | 116-328 |
Cow position: | chr17:24876885-24877100 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 8, 134 |
Conread position: | 117-377 |
Cow position: | chr17:21004082-21003819 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 189 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 71, 132 |
Conread position: | 133-298 |
Cow position: | chr17:14848757-14848600 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 55, 14 |
Conread position: | 141-382 |
Cow position: | chr17:6423534-6423778 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 175 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 47, 38 |
Conread position: | 142-339 |
Cow position: | chr17:1359023-1358830 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 141 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 46, 39 |
Conread position: | 142-367 |
Cow position: | chr17:38200992-38200760 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 163 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 33, 116 |
Conread position: | 147-376 |
Cow position: | chr17:7132676-7132440 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 165 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 41, 102 |
Conread position: | 148-360 |
Cow position: | chr17:30999556-30999760 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 157 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 153, 100 |
Conread position: | 148-371 |
Cow position: | chr17:9778031-9778253 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 162 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 40, 106 |
Conread position: | 148-383 |
Cow position: | chr17:24587398-24587638 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 165 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 40, 101 |
Conread position: | 148-387 |
Cow position: | chr17:24787241-24787004 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 171 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 40, 101 |
Conread position: | 149-368 |
Cow position: | chr17:25128568-25128347 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 42, 60 |
Conread position: | 150-367 |
Cow position: | chr17:32279125-32278905 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 166 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 38, 64 |
Conread position: | 158-361 |
Cow position: | chr17:38646858-38647052 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 153 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 149, 25 |
Conread position: | 162-387 |
Cow position: | chr17:27429372-27429598 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 159 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 26, 95 |
Conread position: | 168-364 |
Cow position: | chr17:5514559-5514757 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 144 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 19, 40 |
Conread position: | 174-364 |
Cow position: | chr17:21697538-21697734 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 142 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 76 |
Conread position: | 187-364 |
Cow position: | chr17:34208000-34207821 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 120, 61 |
Conread position: | 187-386 |
Cow position: | chr17:4436411-4436212 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 114, 54 |
Show alignments to all cow chromosomes.