Cow genome map

Conread name: rcki26_b12.y1

Conread position: 22-387
Cow position: chr17:32027809-32027434 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 228

Conread position: 32-386
Cow position: chr17:28539708-28540049 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 148, 8

Conread position: 34-312
Cow position: chr17:29715520-29715245 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 208

Conread position: 34-319
Cow position: chr17:8644703-8644988 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 95

Conread position: 34-337
Cow position: chr17:43717642-43717346 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 138

Conread position: 34-351
Cow position: chr17:7821368-7821047 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 108

Conread position: 34-351
Cow position: chr17:15103213-15102906 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 154, 19

Conread position: 34-361
Cow position: chr17:6566145-6566460 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 78

Conread position: 34-361
Cow position: chr17:19998802-19999133 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 86, 41

Conread position: 34-362
Cow position: chr17:34317051-34316713 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 223

Conread position: 34-368
Cow position: chr17:1568503-1568171 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 269, 98

Conread position: 34-381
Cow position: chr17:26764683-26765032 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 102

Conread position: 34-390
Cow position: chr17:12059426-12059072 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 105, 7

Conread position: 34-390
Cow position: chr17:32365952-32366305 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 134

Conread position: 35-371
Cow position: chr17:9853653-9853991 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 216

Conread position: 35-381
Cow position: chr17:21336030-21335681 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 70

Conread position: 35-387
Cow position: chr17:13144015-13143671 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 111

Conread position: 39-382
Cow position: chr17:1061385-1061044 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 149, 7

Conread position: 40-355
Cow position: chr17:18592109-18592427 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 261

Conread position: 41-337
Cow position: chr17:11397343-11397638 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 147, 124

Conread position: 42-327
Cow position: chr17:21038955-21039235 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 15

Conread position: 44-376
Cow position: chr17:24553681-24554016 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 14

Conread position: 50-361
Cow position: chr17:3306551-3306861 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 73

Conread position: 59-361
Cow position: chr17:30529845-30529547 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 161

Conread position: 64-361
Cow position: chr17:20889071-20889369 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 123, 115

Conread position: 64-382
Cow position: chr17:25900895-25901212 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 114

Conread position: 79-300
Cow position: chr17:16448045-16448264 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 73

Conread position: 80-380
Cow position: chr17:3471127-3471434 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 72, 160

Conread position: 80-380
Cow position: chr17:12216359-12216060 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 40

Conread position: 83-364
Cow position: chr17:41892340-41892068 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 65

Conread position: 84-383
Cow position: chr17:18109370-18109068 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 158

Conread position: 89-300
Cow position: chr17:12054441-12054648 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 160, 0

Conread position: 93-329
Cow position: chr17:40312453-40312685 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 165, 41

Conread position: 104-383
Cow position: chr17:8079053-8079332 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 101

Conread position: 105-327
Cow position: chr17:25796603-25796379 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 144

Conread position: 107-378
Cow position: chr17:21115206-21114946 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 27

Conread position: 116-328
Cow position: chr17:24876885-24877100 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 8, 134

Conread position: 117-377
Cow position: chr17:21004082-21003819 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 132

Conread position: 133-298
Cow position: chr17:14848757-14848600 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 14

Conread position: 141-382
Cow position: chr17:6423534-6423778 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 38

Conread position: 142-339
Cow position: chr17:1359023-1358830 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 39

Conread position: 142-367
Cow position: chr17:38200992-38200760 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 116

Conread position: 147-376
Cow position: chr17:7132676-7132440 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 102

Conread position: 148-360
Cow position: chr17:30999556-30999760 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 153, 100

Conread position: 148-371
Cow position: chr17:9778031-9778253 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 106

Conread position: 148-383
Cow position: chr17:24587398-24587638 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 101

Conread position: 148-387
Cow position: chr17:24787241-24787004 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 101

Conread position: 149-368
Cow position: chr17:25128568-25128347 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 60

Conread position: 150-367
Cow position: chr17:32279125-32278905 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 64

Conread position: 158-361
Cow position: chr17:38646858-38647052 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 149, 25

Conread position: 162-387
Cow position: chr17:27429372-27429598 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 95

Conread position: 168-364
Cow position: chr17:5514559-5514757 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 40

Conread position: 174-364
Cow position: chr17:21697538-21697734 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 76

Conread position: 187-364
Cow position: chr17:34208000-34207821 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 120, 61

Conread position: 187-386
Cow position: chr17:4436411-4436212 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 114, 54

Show alignments to all cow chromosomes.