Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 22-371 |
| Cow position: | chr19:28014082-28014431 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 32-359 |
| Cow position: | chr19:30518666-30518998 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 159, 54 |
| Conread position: | 34-303 |
| Cow position: | chr19:14572985-14573256 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 148, 21 |
| Conread position: | 34-327 |
| Cow position: | chr19:11395348-11395052 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 160, 215 |
| Conread position: | 34-344 |
| Cow position: | chr19:34654961-34654653 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 34-361 |
| Cow position: | chr19:39661928-39661599 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 73 |
| Conread position: | 34-362 |
| Cow position: | chr19:33306714-33307045 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 103 |
| Conread position: | 34-364 |
| Cow position: | chr19:6688391-6688052 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 212 |
| Conread position: | 34-371 |
| Cow position: | chr19:18786710-18786371 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 34-371 |
| Cow position: | chr19:32450678-32451034 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 89, 229 |
| Conread position: | 34-382 |
| Cow position: | chr19:1901389-1901034 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 217 |
| Conread position: | 34-386 |
| Cow position: | chr19:15068379-15068037 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 181 |
| Conread position: | 34-387 |
| Cow position: | chr19:24061912-24062253 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 35-312 |
| Cow position: | chr19:20699701-20699983 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 115, 99 |
| Conread position: | 35-316 |
| Cow position: | chr19:10754927-10755209 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 20, 108 |
| Conread position: | 35-338 |
| Cow position: | chr19:52457136-52456840 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 150, 84 |
| Conread position: | 35-368 |
| Cow position: | chr19:17795509-17795846 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 35-371 |
| Cow position: | chr19:8496685-8496344 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 151, 107 |
| Conread position: | 35-371 |
| Cow position: | chr19:39751092-39751431 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 56, 123 |
| Conread position: | 35-383 |
| Cow position: | chr19:35380930-35380584 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 295, 79 |
| Conread position: | 35-386 |
| Cow position: | chr19:43431703-43431360 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 153, 99 |
| Conread position: | 39-321 |
| Cow position: | chr19:37633733-37633452 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 210 |
| Conread position: | 40-370 |
| Cow position: | chr19:47118859-47118543 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 148, 49 |
| Conread position: | 40-380 |
| Cow position: | chr19:23785810-23786155 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 40-382 |
| Cow position: | chr19:5185633-5185280 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 42-388 |
| Cow position: | chr19:24669746-24669405 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 226 |
| Conread position: | 43-325 |
| Cow position: | chr19:53463545-53463263 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 43-371 |
| Cow position: | chr19:48409140-48409463 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 49-382 |
| Cow position: | chr19:25696576-25696246 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 138 |
| Conread position: | 62-387 |
| Cow position: | chr19:14592697-14593023 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 196, 5 |
| Conread position: | 63-337 |
| Cow position: | chr19:23404007-23403724 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 96, 194 |
| Conread position: | 63-363 |
| Cow position: | chr19:44757973-44757675 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 86, 189 |
| Conread position: | 83-371 |
| Cow position: | chr19:38596279-38596572 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 83-386 |
| Cow position: | chr19:46454512-46454814 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 92-304 |
| Cow position: | chr19:37502984-37502782 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 166, 87 |
| Conread position: | 105-381 |
| Cow position: | chr19:11066123-11065843 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 85, 144 |
| Conread position: | 115-364 |
| Cow position: | chr19:40051690-40051446 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 83 |
| Conread position: | 116-382 |
| Cow position: | chr19:24144717-24144985 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 117-316 |
| Cow position: | chr19:24936119-24935920 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 112 |
| Conread position: | 141-361 |
| Cow position: | chr19:19561227-19561454 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 142-355 |
| Cow position: | chr19:3496452-3496240 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 107 |
| Conread position: | 142-397 |
| Cow position: | chr19:36059654-36059911 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 145-364 |
| Cow position: | chr19:15887597-15887379 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 148-382 |
| Cow position: | chr19:13316673-13316453 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 159, 31 |
| Conread position: | 151-350 |
| Cow position: | chr19:38638070-38637874 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 151-383 |
| Cow position: | chr19:3812284-3812052 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 151-384 |
| Cow position: | chr19:10545977-10545739 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 58 |
| Conread position: | 162-390 |
| Cow position: | chr19:21378724-21378498 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 163-385 |
| Cow position: | chr19:55589975-55590196 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 167-383 |
| Cow position: | chr19:19919714-19919497 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 208-371 |
| Cow position: | chr19:24137047-24137213 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 40 |
Show alignments to all cow chromosomes.