Cow genome map

Conread name: rcki26_b12.y1

Conread position: 3-294
Cow position:
Alignm length: 306
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 258

Conread position: 14-387
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 155

Conread position: 29-382
Cow position:
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 5

Conread position: 31-162
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 31-400
Cow position:
Alignm length: 377
Alignm identity: 254
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 235, 9

Conread position: 32-364
Cow position:
Alignm length: 345
Alignm identity: 233
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 8

Conread position: 33-329
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 8

Conread position: 33-339
Cow position:
Alignm length: 323
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 106, 231

Conread position: 33-397
Cow position:
Alignm length: 374
Alignm identity: 246
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 148, 174

Conread position: 34-295
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 7

Conread position: 34-300
Cow position:
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 89

Conread position: 34-300
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 120, 219

Conread position: 34-307
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 107, 221

Conread position: 34-321
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 227

Conread position: 34-356
Cow position:
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 77

Conread position: 34-361
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 101

Conread position: 34-364
Cow position:
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 131

Conread position: 34-368
Cow position:
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 131

Conread position: 34-371
Cow position:
Alignm length: 351
Alignm identity: 251
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 118, 76

Conread position: 34-371
Cow position:
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 172

Conread position: 34-371
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 151, 112

Conread position: 34-371
Cow position:
Alignm length: 341
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 139, 152

Conread position: 34-377
Cow position:
Alignm length: 351
Alignm identity: 233
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 159, 91

Conread position: 34-386
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 146

Conread position: 34-387
Cow position:
Alignm length: 365
Alignm identity: 246
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 159, 145

Conread position: 34-387
Cow position:
Alignm length: 369
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 154, 57

Conread position: 34-394
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 154, 100

Conread position: 35-363
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 76

Conread position: 35-364
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 27

Conread position: 35-364
Cow position:
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 20

Conread position: 35-371
Cow position:
Alignm length: 351
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 152

Conread position: 35-371
Cow position:
Alignm length: 342
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 234, 148

Conread position: 35-382
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 18

Conread position: 35-386
Cow position:
Alignm length: 365
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 138, 106

Conread position: 35-387
Cow position:
Alignm length: 361
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 162, 124

Conread position: 35-387
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 172

Conread position: 35-395
Cow position:
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 102

Conread position: 40-340
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 210

Conread position: 40-368
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 102, 73

Conread position: 40-377
Cow position:
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 144

Conread position: 40-382
Cow position:
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 208

Conread position: 40-386
Cow position:
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 88

Conread position: 40-387
Cow position:
Alignm length: 354
Alignm identity: 245
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 148, 92

Conread position: 41-368
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 208

Conread position: 41-382
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 100, 183

Conread position: 42-329
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 139

Conread position: 44-330
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 205

Conread position: 45-315
Cow position:
Alignm length: 275
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 39

Conread position: 47-305
Cow position:
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 141, 63

Conread position: 54-371
Cow position:
Alignm length: 321
Alignm identity: 217
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 204, 80

Conread position: 55-335
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 245, 86

Conread position: 62-328
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 204, 69

Conread position: 63-368
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 175

Conread position: 68-355
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 115, 31

Conread position: 80-387
Cow position:
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 67

Conread position: 80-397
Cow position:
Alignm length: 332
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 177

Conread position: 82-382
Cow position:
Alignm length: 310
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 109, 60

Conread position: 84-362
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 84-380
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 212, 100

Conread position: 87-382
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 100, 48

Conread position: 94-350
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 94, 155

Conread position: 105-383
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 74

Conread position: 107-333
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 159, 78

Conread position: 115-376
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 19

Conread position: 129-362
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 83

Conread position: 132-307
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 117

Conread position: 132-387
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 75

Conread position: 136-382
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 113

Conread position: 136-397
Cow position:
Alignm length: 271
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 113

Conread position: 141-364
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 67

Conread position: 141-366
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 71

Conread position: 141-386
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 108

Conread position: 144-397
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 11, 106

Conread position: 145-364
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 34

Conread position: 147-362
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 40, 102

Conread position: 147-362
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 40, 102

Conread position: 147-369
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 151, 103

Conread position: 150-370
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 71

Conread position: 152-377
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 90

Conread position: 156-364
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 29

Conread position: 159-386
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 23

Conread position: 159-393
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 90

Conread position: 162-382
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 80

Conread position: 162-390
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 88

Conread position: 163-383
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 89

Conread position: 174-368
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 75

Conread position: 187-397
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 61

Show alignments to all cow chromosomes.