Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 2-386 |
| Cow position: | chr20:15068789-15069161 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 188, 27 |
| Conread position: | 22-361 |
| Cow position: | chr20:11614388-11614046 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 228 |
| Conread position: | 33-323 |
| Cow position: | chr20:4950753-4950461 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 158, 165 |
| Conread position: | 33-359 |
| Cow position: | chr20:27877390-27877723 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 34-294 |
| Cow position: | chr20:11176579-11176318 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 153, 215 |
| Conread position: | 34-295 |
| Cow position: | chr20:19352093-19351838 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 224, 110 |
| Conread position: | 34-316 |
| Cow position: | chr20:20778872-20778601 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 160, 80 |
| Conread position: | 34-317 |
| Cow position: | chr20:9014680-9014393 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 215 |
| Conread position: | 34-321 |
| Cow position: | chr20:12839726-12840009 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 120 |
| Conread position: | 34-364 |
| Cow position: | chr20:12442022-12441686 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 50 |
| Conread position: | 34-364 |
| Cow position: | chr20:17734101-17733775 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 222, 89 |
| Conread position: | 34-368 |
| Cow position: | chr20:19313397-19313060 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 120 |
| Conread position: | 34-368 |
| Cow position: | chr20:23792272-23792612 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 168, 145 |
| Conread position: | 34-386 |
| Cow position: | chr20:6258394-6258040 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 22 |
| Conread position: | 34-387 |
| Cow position: | chr20:8577916-8578270 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 157, 19 |
| Conread position: | 35-307 |
| Cow position: | chr20:13821913-13821643 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 234, 150 |
| Conread position: | 35-307 |
| Cow position: | chr20:14719071-14718803 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 146 |
| Conread position: | 35-321 |
| Cow position: | chr20:34836195-34835916 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 233, 95 |
| Conread position: | 35-329 |
| Cow position: | chr20:5702417-5702709 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 107 |
| Conread position: | 35-363 |
| Cow position: | chr20:17903828-17904158 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 143, 99 |
| Conread position: | 35-376 |
| Cow position: | chr20:31927789-31927446 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 154, 214 |
| Conread position: | 35-382 |
| Cow position: | chr20:6096815-6096476 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 247 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 153, 20 |
| Conread position: | 40-333 |
| Cow position: | chr20:4893239-4892939 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 98, 218 |
| Conread position: | 40-381 |
| Cow position: | chr20:18321120-18320775 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 134, 89 |
| Conread position: | 45-387 |
| Cow position: | chr20:24069494-24069827 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 261, 119 |
| Conread position: | 46-393 |
| Cow position: | chr20:3034775-3035129 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 49-345 |
| Cow position: | chr20:4781235-4781538 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 63-386 |
| Cow position: | chr20:5998977-5998650 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 189 |
| Conread position: | 80-382 |
| Cow position: | chr20:6240815-6240502 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 222 |
| Conread position: | 91-364 |
| Cow position: | chr20:21714477-21714755 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 94-386 |
| Cow position: | chr20:10178382-10178077 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 115-387 |
| Cow position: | chr20:3607202-3606939 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 126-300 |
| Cow position: | chr20:39050419-39050244 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 123 |
| Conread position: | 127-387 |
| Cow position: | chr20:10200102-10200365 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 128 |
| Conread position: | 128-387 |
| Cow position: | chr20:10208567-10208829 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 140, 7 |
| Conread position: | 132-333 |
| Cow position: | chr20:1640681-1640477 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 133-368 |
| Cow position: | chr20:3331527-3331284 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 134-382 |
| Cow position: | chr20:11341037-11340782 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 115 |
| Conread position: | 141-371 |
| Cow position: | chr20:8910699-8910924 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 147-371 |
| Cow position: | chr20:11741522-11741294 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 148-377 |
| Cow position: | chr20:14735459-14735689 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 151-387 |
| Cow position: | chr20:22704073-22704316 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 152-331 |
| Cow position: | chr20:5116519-5116339 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 168-382 |
| Cow position: | chr20:8556472-8556252 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 175-363 |
| Cow position: | chr20:13994618-13994811 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 210-368 |
| Cow position: | chr20:5636325-5636487 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 39 |
Show alignments to all cow chromosomes.