Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 17-397 |
| Cow position: | chr22:13861193-13861569 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 261 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 99, 118 |
| Conread position: | 26-368 |
| Cow position: | chr22:4990553-4990211 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 164, 18 |
| Conread position: | 32-360 |
| Cow position: | chr22:19340822-19341156 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 119, 7 |
| Conread position: | 32-371 |
| Cow position: | chr22:20626463-20626799 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 8 |
| Conread position: | 33-300 |
| Cow position: | chr22:44936794-44937066 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 180 |
| Conread position: | 33-316 |
| Cow position: | chr22:5364117-5363832 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 156, 216 |
| Conread position: | 33-387 |
| Cow position: | chr22:38439531-38439183 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 34-300 |
| Cow position: | chr22:11211972-11211710 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 34-312 |
| Cow position: | chr22:10630997-10631274 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 224, 150 |
| Conread position: | 34-329 |
| Cow position: | chr22:33986141-33985848 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 34-331 |
| Cow position: | chr22:10122011-10122307 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 104 |
| Conread position: | 34-360 |
| Cow position: | chr22:8732939-8732614 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 145 |
| Conread position: | 34-363 |
| Cow position: | chr22:40121240-40120927 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 146, 100 |
| Conread position: | 34-364 |
| Cow position: | chr22:19738948-19738619 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 224, 110 |
| Conread position: | 34-371 |
| Cow position: | chr22:10302633-10302976 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 110 |
| Conread position: | 34-371 |
| Cow position: | chr22:25943103-25943435 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 220 |
| Conread position: | 34-376 |
| Cow position: | chr22:4119946-4119599 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 208 |
| Conread position: | 34-376 |
| Cow position: | chr22:6123263-6122937 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 270, 95 |
| Conread position: | 34-377 |
| Cow position: | chr22:1342364-1342701 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 273, 100 |
| Conread position: | 34-387 |
| Cow position: | chr22:10161588-10161939 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 97 |
| Conread position: | 34-387 |
| Cow position: | chr22:31646116-31646467 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 219 |
| Conread position: | 34-408 |
| Cow position: | chr22:11613050-11613421 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 146 |
| Conread position: | 35-329 |
| Cow position: | chr22:15951253-15950958 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 35-329 |
| Cow position: | chr22:34931130-34930830 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 101, 211 |
| Conread position: | 35-360 |
| Cow position: | chr22:10920238-10919904 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 35-364 |
| Cow position: | chr22:29955374-29955046 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 155, 96 |
| Conread position: | 35-367 |
| Cow position: | chr22:38313859-38313512 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 225 |
| Conread position: | 35-371 |
| Cow position: | chr22:13769109-13769430 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 35-371 |
| Cow position: | chr22:14844191-14844528 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 116, 45 |
| Conread position: | 35-380 |
| Cow position: | chr22:21502360-21502711 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 49 |
| Conread position: | 35-383 |
| Cow position: | chr22:4645401-4645745 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 35-386 |
| Cow position: | chr22:26316102-26316445 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 260, 130 |
| Conread position: | 35-387 |
| Cow position: | chr22:4337732-4338087 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 100 |
| Conread position: | 35-397 |
| Cow position: | chr22:30689254-30689618 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 214 |
| Conread position: | 35-409 |
| Cow position: | chr22:1064758-1065120 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 170 |
| Conread position: | 40-295 |
| Cow position: | chr22:32892328-32892579 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 228, 133 |
| Conread position: | 40-319 |
| Cow position: | chr22:29290508-29290229 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 148, 139 |
| Conread position: | 41-340 |
| Cow position: | chr22:14366324-14366027 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 29 |
| Conread position: | 42-300 |
| Cow position: | chr22:13206214-13205956 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 119 |
| Conread position: | 42-330 |
| Cow position: | chr22:5930478-5930190 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 277 |
| Conread position: | 42-390 |
| Cow position: | chr22:9127023-9127388 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 12, 150 |
| Conread position: | 44-321 |
| Cow position: | chr22:12527795-12527525 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 139, 110 |
| Conread position: | 46-387 |
| Cow position: | chr22:41983070-41982743 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 142, 88 |
| Conread position: | 47-330 |
| Cow position: | chr22:24611441-24611165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 195 |
| Conread position: | 54-312 |
| Cow position: | chr22:28120433-28120692 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 195 |
| Conread position: | 55-300 |
| Cow position: | chr22:23865105-23865350 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 133, 124 |
| Conread position: | 55-382 |
| Cow position: | chr22:3960653-3960312 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 197 |
| Conread position: | 60-371 |
| Cow position: | chr22:22160369-22160684 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 118 |
| Conread position: | 80-364 |
| Cow position: | chr22:40071637-40071928 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 108, 226 |
| Conread position: | 80-371 |
| Cow position: | chr22:23856716-23857008 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 169 |
| Conread position: | 82-371 |
| Cow position: | chr22:43397689-43397973 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 103 |
| Conread position: | 83-388 |
| Cow position: | chr22:26134561-26134251 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 84-364 |
| Cow position: | chr22:22861239-22860956 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 104, 95 |
| Conread position: | 105-368 |
| Cow position: | chr22:2502531-2502784 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 107-368 |
| Cow position: | chr22:23138506-23138252 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 159, 24 |
| Conread position: | 116-380 |
| Cow position: | chr22:3993314-3993581 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 72, 126 |
| Conread position: | 141-367 |
| Cow position: | chr22:19848666-19848439 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 125, 67 |
| Conread position: | 160-382 |
| Cow position: | chr22:47582654-47582872 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 164-387 |
| Cow position: | chr22:25222149-25221922 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 166-389 |
| Cow position: | chr22:7882303-7882530 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 173-368 |
| Cow position: | chr22:23403880-23403691 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 187-364 |
| Cow position: | chr22:1590796-1590976 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 120, 46 |
| Conread position: | 192-383 |
| Cow position: | chr22:10403715-10403527 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.