Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 22-300 |
| Cow position: | chr24:17993085-17992808 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 169, 184 |
| Conread position: | 34-329 |
| Cow position: | chr24:18025364-18025076 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 154, 113 |
| Conread position: | 34-363 |
| Cow position: | chr24:11006815-11007151 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 122, 216 |
| Conread position: | 34-371 |
| Cow position: | chr24:19658148-19658495 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 218 |
| Conread position: | 34-381 |
| Cow position: | chr24:7001467-7001117 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 144, 19 |
| Conread position: | 34-383 |
| Cow position: | chr24:27720148-27719804 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 152, 95 |
| Conread position: | 34-387 |
| Cow position: | chr24:28496987-28496628 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 145 |
| Conread position: | 34-387 |
| Cow position: | chr24:31811788-31812143 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 113 |
| Conread position: | 35-311 |
| Cow position: | chr24:19466331-19466055 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 164 |
| Conread position: | 35-330 |
| Cow position: | chr24:24002580-24002873 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 150 |
| Conread position: | 35-364 |
| Cow position: | chr24:6071200-6071530 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 99 |
| Conread position: | 35-364 |
| Cow position: | chr24:21264904-21264576 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 260, 128 |
| Conread position: | 35-364 |
| Cow position: | chr24:27906030-27906370 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 221 |
| Conread position: | 35-368 |
| Cow position: | chr24:32205194-32204858 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 219 |
| Conread position: | 35-368 |
| Cow position: | chr24:36486462-36486123 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 51 |
| Conread position: | 35-382 |
| Cow position: | chr24:7917767-7917413 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 152 |
| Conread position: | 40-371 |
| Cow position: | chr24:3493503-3493825 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 15 |
| Conread position: | 41-387 |
| Cow position: | chr24:28062554-28062906 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 112, 82 |
| Conread position: | 44-356 |
| Cow position: | chr24:39219235-39218916 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 135 |
| Conread position: | 45-364 |
| Cow position: | chr24:43635042-43635367 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 139 |
| Conread position: | 58-394 |
| Cow position: | chr24:39483101-39483440 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 130, 101 |
| Conread position: | 61-375 |
| Cow position: | chr24:37650307-37650614 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 126, 73 |
| Conread position: | 63-386 |
| Cow position: | chr24:43363990-43364315 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 66-313 |
| Cow position: | chr24:15288490-15288737 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 122, 183 |
| Conread position: | 80-371 |
| Cow position: | chr24:29679664-29679370 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 80-386 |
| Cow position: | chr24:29027699-29027999 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 227, 54 |
| Conread position: | 82-329 |
| Cow position: | chr24:34532772-34533021 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 89-386 |
| Cow position: | chr24:5754497-5754790 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 99, 139 |
| Conread position: | 97-350 |
| Cow position: | chr24:27735907-27735662 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 71 |
| Conread position: | 105-350 |
| Cow position: | chr24:18734688-18734433 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 128-316 |
| Cow position: | chr24:19804381-19804571 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 122 |
| Conread position: | 141-363 |
| Cow position: | chr24:35795033-35794807 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 5, 109 |
| Conread position: | 143-393 |
| Cow position: | chr24:36404437-36404182 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 115, 108 |
| Conread position: | 147-350 |
| Cow position: | chr24:2730856-2730655 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 148-364 |
| Cow position: | chr24:30229181-30229403 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 156-397 |
| Cow position: | chr24:27967803-27968044 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 93 |
Show alignments to all cow chromosomes.