Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 33-359 |
| Cow position: | chr25:36392341-36392010 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 158, 53 |
| Conread position: | 33-413 |
| Cow position: | chr25:13960689-13961068 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 158, 117 |
| Conread position: | 34-316 |
| Cow position: | chr25:21193320-21193038 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 150 |
| Conread position: | 34-355 |
| Cow position: | chr25:1735687-1735368 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 154, 113 |
| Conread position: | 34-355 |
| Cow position: | chr25:21209323-21209007 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 101 |
| Conread position: | 34-371 |
| Cow position: | chr25:2110708-2111029 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 21 |
| Conread position: | 34-380 |
| Cow position: | chr25:20069350-20069693 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 155, 36 |
| Conread position: | 34-381 |
| Cow position: | chr25:27531642-27531303 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 118, 35 |
| Conread position: | 34-381 |
| Cow position: | chr25:38972457-38972807 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 152, 39 |
| Conread position: | 34-382 |
| Cow position: | chr25:5792177-5791829 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 154, 9 |
| Conread position: | 35-329 |
| Cow position: | chr25:20403095-20402797 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 144 |
| Conread position: | 35-348 |
| Cow position: | chr25:16866862-16867167 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 223, 64 |
| Conread position: | 35-364 |
| Cow position: | chr25:17658239-17658562 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 144 |
| Conread position: | 35-371 |
| Cow position: | chr25:10643682-10643347 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 22 |
| Conread position: | 35-386 |
| Cow position: | chr25:787897-788240 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 153, 39 |
| Conread position: | 35-417 |
| Cow position: | chr25:5514633-5515014 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 96 |
| Conread position: | 40-329 |
| Cow position: | chr25:4548093-4547801 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 101 |
| Conread position: | 40-355 |
| Cow position: | chr25:35608097-35607777 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 40-377 |
| Cow position: | chr25:3992419-3992750 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 148, 204 |
| Conread position: | 40-390 |
| Cow position: | chr25:4680869-4681213 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 218, 68 |
| Conread position: | 42-379 |
| Cow position: | chr25:16922163-16921827 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 124 |
| Conread position: | 43-386 |
| Cow position: | chr25:35347535-35347884 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 44-316 |
| Cow position: | chr25:27621716-27621991 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 45-337 |
| Cow position: | chr25:26238503-26238796 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 206 |
| Conread position: | 46-308 |
| Cow position: | chr25:9842642-9842897 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 49-364 |
| Cow position: | chr25:40321655-40321343 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 50-292 |
| Cow position: | chr25:11051022-11051256 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 208, 129 |
| Conread position: | 84-383 |
| Cow position: | chr25:9961493-9961196 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 87-371 |
| Cow position: | chr25:6424905-6424626 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 171, 35 |
| Conread position: | 105-359 |
| Cow position: | chr25:23407150-23406888 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 105-386 |
| Cow position: | chr25:12817067-12817351 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 83, 76 |
| Conread position: | 115-371 |
| Cow position: | chr25:6474396-6474135 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 66 |
| Conread position: | 124-364 |
| Cow position: | chr25:21895174-21894932 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 128-313 |
| Cow position: | chr25:10330677-10330500 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 130, 67 |
| Conread position: | 141-383 |
| Cow position: | chr25:14196585-14196832 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 148-387 |
| Cow position: | chr25:24452431-24452199 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 150-370 |
| Cow position: | chr25:12778795-12778574 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 150-382 |
| Cow position: | chr25:19679081-19679314 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 154-381 |
| Cow position: | chr25:7581684-7581454 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 170-393 |
| Cow position: | chr25:15377092-15377305 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 189-386 |
| Cow position: | chr25:7329323-7329525 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 60 |
Show alignments to all cow chromosomes.