Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 33-300 |
| Cow position: | chr27:15644125-15644392 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 158, 216 |
| Conread position: | 33-327 |
| Cow position: | chr27:18922782-18922491 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 146 |
| Conread position: | 34-274 |
| Cow position: | chr27:427450-427216 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 139, 87 |
| Conread position: | 34-333 |
| Cow position: | chr27:21408220-21408526 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 36 |
| Conread position: | 34-337 |
| Cow position: | chr27:22179456-22179765 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 34-368 |
| Cow position: | chr27:4829484-4829805 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 153, 42 |
| Conread position: | 34-371 |
| Cow position: | chr27:23632927-23632588 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 153, 53 |
| Conread position: | 34-383 |
| Cow position: | chr27:23472579-23472237 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 142, 53 |
| Conread position: | 34-387 |
| Cow position: | chr27:26433483-26433833 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 101 |
| Conread position: | 35-337 |
| Cow position: | chr27:13317635-13317930 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 153, 108 |
| Conread position: | 35-387 |
| Cow position: | chr27:1058353-1058703 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 35-387 |
| Cow position: | chr27:31230765-31231112 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 101 |
| Conread position: | 40-376 |
| Cow position: | chr27:435567-435223 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 40-386 |
| Cow position: | chr27:30868415-30868762 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 218, 139 |
| Conread position: | 40-387 |
| Cow position: | chr27:28276593-28276260 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 148, 15 |
| Conread position: | 40-397 |
| Cow position: | chr27:15454538-15454180 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 210 |
| Conread position: | 41-348 |
| Cow position: | chr27:27141916-27141616 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 138 |
| Conread position: | 42-299 |
| Cow position: | chr27:16823133-16822883 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 145, 63 |
| Conread position: | 43-300 |
| Cow position: | chr27:264568-264317 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 214, 91 |
| Conread position: | 44-381 |
| Cow position: | chr27:16787153-16786811 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 210 |
| Conread position: | 63-381 |
| Cow position: | chr27:28207100-28206784 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 125, 186 |
| Conread position: | 79-364 |
| Cow position: | chr27:30362529-30362246 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 130 |
| Conread position: | 80-371 |
| Cow position: | chr27:23882080-23882384 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 56, 138 |
| Conread position: | 80-386 |
| Cow position: | chr27:28189932-28190236 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 169 |
| Conread position: | 81-300 |
| Cow position: | chr27:16099733-16099957 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 172 |
| Conread position: | 94-352 |
| Cow position: | chr27:20067716-20067964 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 99-383 |
| Cow position: | chr27:6550717-6550438 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 89, 150 |
| Conread position: | 108-371 |
| Cow position: | chr27:26508904-26509167 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 158, 75 |
| Conread position: | 120-371 |
| Cow position: | chr27:28518530-28518288 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 187, 129 |
| Conread position: | 123-382 |
| Cow position: | chr27:22220796-22220538 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 65, 129 |
| Conread position: | 123-390 |
| Cow position: | chr27:30890528-30890264 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 128-387 |
| Cow position: | chr27:6500302-6500039 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 60, 121 |
| Conread position: | 140-386 |
| Cow position: | chr27:24321413-24321164 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 144-337 |
| Cow position: | chr27:28038116-28038312 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 149-348 |
| Cow position: | chr27:21452854-21453059 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 150-387 |
| Cow position: | chr27:27640777-27641024 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 152-387 |
| Cow position: | chr27:18593481-18593247 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 32 |
| Conread position: | 160-382 |
| Cow position: | chr27:26885046-26885270 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 162-390 |
| Cow position: | chr27:19685511-19685738 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 206-386 |
| Cow position: | chr27:19896915-19896733 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 208-382 |
| Cow position: | chr27:15643332-15643152 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 40 |
Show alignments to all cow chromosomes.