Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 6-337 |
| Cow position: | chr28:15590602-15590918 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 22-359 |
| Cow position: | chr28:30098750-30099093 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 169, 227 |
| Conread position: | 24-359 |
| Cow position: | chr28:9267723-9268058 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 167, 20 |
| Conread position: | 33-300 |
| Cow position: | chr28:1811111-1810849 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 158, 50 |
| Conread position: | 33-300 |
| Cow position: | chr28:5361385-5361118 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 158, 216 |
| Conread position: | 33-300 |
| Cow position: | chr28:22254307-22254049 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 158, 69 |
| Conread position: | 33-397 |
| Cow position: | chr28:9285733-9285381 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 155, 47 |
| Conread position: | 34-313 |
| Cow position: | chr28:11733494-11733213 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 153, 215 |
| Conread position: | 34-329 |
| Cow position: | chr28:8372102-8372397 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 107 |
| Conread position: | 34-329 |
| Cow position: | chr28:14657328-14657625 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 108, 46 |
| Conread position: | 34-340 |
| Cow position: | chr28:7268302-7268002 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 154, 91 |
| Conread position: | 34-350 |
| Cow position: | chr28:12430237-12430555 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 34-359 |
| Cow position: | chr28:786543-786874 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 157, 303 |
| Conread position: | 34-361 |
| Cow position: | chr28:18590892-18591226 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 35-310 |
| Cow position: | chr28:21104212-21103941 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 153, 99 |
| Conread position: | 35-371 |
| Cow position: | chr28:17316496-17316836 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 84 |
| Conread position: | 35-386 |
| Cow position: | chr28:21868083-21868440 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 145 |
| Conread position: | 35-388 |
| Cow position: | chr28:11426904-11426556 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 232, 78 |
| Conread position: | 40-335 |
| Cow position: | chr28:5805156-5805448 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 99, 203 |
| Conread position: | 40-371 |
| Cow position: | chr28:5129075-5128763 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 218, 78 |
| Conread position: | 40-380 |
| Cow position: | chr28:3024271-3023939 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 8 |
| Conread position: | 42-383 |
| Cow position: | chr28:11752506-11752161 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 207 |
| Conread position: | 46-368 |
| Cow position: | chr28:13267424-13267753 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 77 |
| Conread position: | 51-383 |
| Cow position: | chr28:8787198-8787520 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 253, 134 |
| Conread position: | 58-337 |
| Cow position: | chr28:16441045-16441316 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 133, 76 |
| Conread position: | 59-363 |
| Cow position: | chr28:17030053-17029759 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 65-335 |
| Cow position: | chr28:1884888-1885163 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 125, 256 |
| Conread position: | 67-387 |
| Cow position: | chr28:12758843-12758517 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 118 |
| Conread position: | 80-368 |
| Cow position: | chr28:14933639-14933932 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 99 |
| Conread position: | 81-387 |
| Cow position: | chr28:4880586-4880283 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 161 |
| Conread position: | 81-387 |
| Cow position: | chr28:7751622-7751318 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 82-307 |
| Cow position: | chr28:25334698-25334926 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 168 |
| Conread position: | 148-362 |
| Cow position: | chr28:33051765-33051988 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 167 |
| Conread position: | 151-363 |
| Cow position: | chr28:5236852-5236643 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 34 |
| Conread position: | 154-364 |
| Cow position: | chr28:22321173-22321388 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 155-382 |
| Cow position: | chr28:4914350-4914114 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 166-383 |
| Cow position: | chr28:23775808-23776026 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 167-387 |
| Cow position: | chr28:16204570-16204346 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 169-361 |
| Cow position: | chr28:3077759-3077948 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 79 |
| Conread position: | 187-380 |
| Cow position: | chr28:7980634-7980444 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 187-383 |
| Cow position: | chr28:2738027-2737826 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 193-387 |
| Cow position: | chr28:25282995-25283183 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 31 |
Show alignments to all cow chromosomes.