Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 3-328 |
| Cow position: | chr29:14888715-14889040 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 18 |
| Conread position: | 33-300 |
| Cow position: | chr29:20255019-20255286 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 158, 146 |
| Conread position: | 34-300 |
| Cow position: | chr29:3584501-3584234 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 153, 249 |
| Conread position: | 34-300 |
| Cow position: | chr29:38910380-38910113 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 155, 215 |
| Conread position: | 34-301 |
| Cow position: | chr29:29632313-29632046 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 157, 147 |
| Conread position: | 34-329 |
| Cow position: | chr29:19756072-19756363 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 215 |
| Conread position: | 34-364 |
| Cow position: | chr29:24952311-24952643 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 21 |
| Conread position: | 34-378 |
| Cow position: | chr29:28868256-28868605 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 7 |
| Conread position: | 34-381 |
| Cow position: | chr29:36530488-36530837 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 34-386 |
| Cow position: | chr29:8125969-8125612 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 152 |
| Conread position: | 35-377 |
| Cow position: | chr29:36216744-36217084 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 103 |
| Conread position: | 35-381 |
| Cow position: | chr29:87388-87045 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 82 |
| Conread position: | 35-384 |
| Cow position: | chr29:6925643-6925986 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 35-386 |
| Cow position: | chr29:19761900-19762247 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 99 |
| Conread position: | 40-329 |
| Cow position: | chr29:4875274-4874977 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 45, 216 |
| Conread position: | 42-317 |
| Cow position: | chr29:26290949-26290675 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 144, 91 |
| Conread position: | 42-381 |
| Cow position: | chr29:7041201-7040872 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 61 |
| Conread position: | 48-386 |
| Cow position: | chr29:23874095-23874436 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 128, 75 |
| Conread position: | 50-349 |
| Cow position: | chr29:41850177-41849877 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 52-329 |
| Cow position: | chr29:20429327-20429052 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 82 |
| Conread position: | 60-330 |
| Cow position: | chr29:40903069-40902803 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 247, 188 |
| Conread position: | 62-387 |
| Cow position: | chr29:1325093-1325420 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 259, 117 |
| Conread position: | 80-292 |
| Cow position: | chr29:1582955-1582744 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 186, 36 |
| Conread position: | 81-306 |
| Cow position: | chr29:12901433-12901218 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 177, 62 |
| Conread position: | 81-383 |
| Cow position: | chr29:40892043-40891722 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 180 |
| Conread position: | 83-377 |
| Cow position: | chr29:7408217-7407921 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 168 |
| Conread position: | 107-300 |
| Cow position: | chr29:22720828-22721017 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 81, 26 |
| Conread position: | 120-367 |
| Cow position: | chr29:22162547-22162295 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 129 |
| Conread position: | 121-364 |
| Cow position: | chr29:11562325-11562568 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 132-361 |
| Cow position: | chr29:34360072-34359854 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 133-383 |
| Cow position: | chr29:3395833-3396078 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 135-368 |
| Cow position: | chr29:4065814-4066045 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 149-363 |
| Cow position: | chr29:16756794-16757012 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 155-371 |
| Cow position: | chr29:356071-356281 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 164-368 |
| Cow position: | chr29:20903534-20903328 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 173-382 |
| Cow position: | chr29:4520098-4520309 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 187-364 |
| Cow position: | chr29:2532839-2533014 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 61 |
Show alignments to all cow chromosomes.