Cow genome map


           Conread name:
           rcki26_b12.y1
        

               Conread position:
               13-387
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 237
               

               Conread position:
               22-371
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 235
               

               Conread position:
               32-308
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               156, 10
               

               Conread position:
               33-300
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               160, 146
               

               Conread position:
               33-301
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               158, 27
               

               Conread position:
               33-376
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               148, 158
               

               Conread position:
               33-397
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               225, 154
               

               Conread position:
               33-397
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               160, 101
               

               Conread position:
               34-307
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               154, 215
               

               Conread position:
               34-327
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               154, 107
               

               Conread position:
               34-329
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 215
               

               Conread position:
               34-333
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               34-334
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               154, 108
               

               Conread position:
               34-355
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               101, 225
               

               Conread position:
               34-377
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 218
               

               Conread position:
               34-380
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               98, 224
               

               Conread position:
               34-381
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 151
               

               Conread position:
               34-381
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               224, 144
               

               Conread position:
               34-382
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 118
               

               Conread position:
               34-382
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 208
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 149
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 121
               

               Conread position:
               34-387
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               108, 119
               

               Conread position:
               35-329
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               231, 216
               

               Conread position:
               35-337
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               159, 215
               

               Conread position:
               35-363
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 117
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               108, 202
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               130, 145
               

               Conread position:
               35-371
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               152, 51
               

               Conread position:
               35-381
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               223, 51
               

               Conread position:
               35-381
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 148
               

               Conread position:
               35-383
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               153, 195
               

               Conread position:
               39-388
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               114, 213
               

               Conread position:
               40-371
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               91, 147
               

               Conread position:
               40-386
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 59
               

               Conread position:
               40-414
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 139
               

               Conread position:
               41-364
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               102, 79
               

               Conread position:
               41-387
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 100
               

               Conread position:
               42-376
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 44
               

               Conread position:
               44-408
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 108
               

               Conread position:
               55-364
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               59-307
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 193
               

               Conread position:
               79-368
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               109, 26
               

               Conread position:
               80-380
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               178, 118
               

               Conread position:
               90-417
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               217, 207
               

               Conread position:
               94-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               117-354
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               123-329
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               39, 133
               

               Conread position:
               129-295
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 120
               

               Conread position:
               135-363
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 6
               

               Conread position:
               140-337
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               34, 110
               

               Conread position:
               141-361
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 111
               

               Conread position:
               141-371
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 108
               

               Conread position:
               141-386
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               144-291
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 105
               

               Conread position:
               147-368
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               110, 101
               

               Conread position:
               148-379
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               152-371
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               116, 96
               

               Conread position:
               154-362
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               156-382
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               162-368
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               186-387
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               121, 8
               

               Conread position:
               213-366
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 38
               
Show alignments to all cow chromosomes.