Cow genome map

Conread name: rcki26_b12.y1

Conread position: 22-368
Cow position: chr6:2607266-2607615 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 110

Conread position: 33-332
Cow position: chr6:45666126-45665825 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 148, 176

Conread position: 33-383
Cow position: chr6:65870689-65871044 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 47

Conread position: 33-386
Cow position: chr6:58031787-58032139 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 154, 96

Conread position: 34-299
Cow position: chr6:7253773-7253495 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 227

Conread position: 34-302
Cow position: chr6:37331629-37331891 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 94

Conread position: 34-315
Cow position: chr6:13741363-13741640 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 89

Conread position: 34-316
Cow position: chr6:12844975-12845256 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 86, 152

Conread position: 34-317
Cow position: chr6:10605349-10605637 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 216

Conread position: 34-329
Cow position: chr6:18080850-18080550 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 180

Conread position: 34-329
Cow position: chr6:46666772-46667069 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 101, 33

Conread position: 34-333
Cow position: chr6:21312090-21311787 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 100

Conread position: 34-338
Cow position: chr6:24031040-24031347 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 154, 215

Conread position: 34-362
Cow position: chr6:12550933-12551262 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 145

Conread position: 34-364
Cow position: chr6:61631948-61631612 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 154, 100

Conread position: 34-380
Cow position: chr6:2546909-2547258 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 24

Conread position: 35-300
Cow position: chr6:25358743-25359003 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 206, 149

Conread position: 35-300
Cow position: chr6:54806889-54807155 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 155, 214

Conread position: 35-334
Cow position: chr6:41824162-41823859 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 145, 230

Conread position: 35-362
Cow position: chr6:8804877-8804536 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 73

Conread position: 35-364
Cow position: chr6:5958349-5958030 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 70

Conread position: 35-371
Cow position: chr6:606928-607263 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 214

Conread position: 35-387
Cow position: chr6:1770528-1770180 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 27

Conread position: 36-337
Cow position: chr6:12623138-12623437 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 149

Conread position: 40-329
Cow position: chr6:54140490-54140767 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 148, 15

Conread position: 40-350
Cow position: chr6:1784094-1783795 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 148, 79

Conread position: 41-383
Cow position: chr6:17090265-17090614 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 93, 73

Conread position: 47-393
Cow position: chr6:35181574-35181236 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 69

Conread position: 59-383
Cow position: chr6:5609768-5609431 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 211

Conread position: 80-367
Cow position: chr6:34196437-34196151 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 108, 172

Conread position: 81-386
Cow position: chr6:63272905-63272593 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 69, 171

Conread position: 82-298
Cow position: chr6:642864-642647 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 107, 169

Conread position: 94-371
Cow position: chr6:42961642-42961358 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 163

Conread position: 105-398
Cow position: chr6:35471790-35471488 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 147

Conread position: 120-313
Cow position: chr6:3719257-3719061 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 57, 131

Conread position: 120-387
Cow position: chr6:31535821-31535551 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 130

Conread position: 124-328
Cow position: chr6:1002479-1002277 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 39

Conread position: 132-377
Cow position: chr6:13040215-13040459 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 80

Conread position: 141-377
Cow position: chr6:60350527-60350285 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 108

Conread position: 147-328
Cow position: chr6:59302046-59301864 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 12

Conread position: 147-364
Cow position: chr6:45160513-45160298 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 39

Conread position: 148-367
Cow position: chr6:39994682-39994462 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 104

Conread position: 149-318
Cow position: chr6:21184736-21184904 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 39, 93

Conread position: 149-368
Cow position: chr6:34031448-34031662 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 89

Conread position: 159-364
Cow position: chr6:53139139-53138925 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 90

Conread position: 160-386
Cow position: chr6:24961936-24962161 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 89

Conread position: 208-387
Cow position: chr6:44984166-44984348 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 99, 40

Show alignments to all cow chromosomes.